RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 DUSP9Q99956 384 aaKnown RBP22.7■■□□□ 1.22
SPNS1-203ENST00000334536 TRIM9Q9C026 710 aa22.7■■□□□ 1.22
SPNS1-203ENST00000334536 HAUS4Q9H6D7 363 aa22.7■■□□□ 1.22
SPNS1-203ENST00000334536 EXOC1Q9NV70 894 aa22.7■■□□□ 1.22
SPNS1-203ENST00000334536 MYH8P13535 1937 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 FESP07332 822 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 GOLGA8HP0CJ92 632 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 HOXA7P31268 230 aaPredicted RBP22.69■■□□□ 1.22
SPNS1-203ENST00000334536 GPSM2P81274 684 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 TTMPQ5BVD1 217 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 CORO1CQ9ULV4 474 aaPredicted RBP22.69■■□□□ 1.22
SPNS1-203ENST00000334536 DDX60LQ5H9U9 1706 aaKnown RBP22.69■■□□□ 1.22
SPNS1-203ENST00000334536 CCNT1O60563 726 aaKnown RBP22.69■■□□□ 1.22
SPNS1-203ENST00000334536 DNAJC8O75937 253 aaPredicted RBP22.69■■□□□ 1.22
SPNS1-203ENST00000334536 TXNRD1Q16881 649 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 LETM2Q2VYF4 491 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 ARMC9Q7Z3E5 817 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 MMGT1Q8N4V1 131 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 CSGALNACT2Q8N6G5 542 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 RPGRQ92834 1020 aaKnown RBP22.69■■□□□ 1.22
SPNS1-203ENST00000334536 IQCDQ96DY2 449 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 CCT8L2Q96SF2 557 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 CHP1Q99653 195 aa22.69■■□□□ 1.22
SPNS1-203ENST00000334536 QTRT2Q9H974 415 aaKnown RBP22.69■■□□□ 1.22
SPNS1-203ENST00000334536 ANO9A1A5B4 782 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 TFRCP02786 760 aaKnown RBP22.68■■□□□ 1.22
SPNS1-203ENST00000334536 GHRP10912 638 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 RAB27AP51159 221 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 MEA1Q16626 185 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 CAPRIN2Q6IMN6 1127 aaKnown RBP22.68■■□□□ 1.22
SPNS1-203ENST00000334536 LRRC15Q8TF66 581 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 SCLT1Q96NL6 688 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 MMS19Q96T76 1030 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 PLIN2Q99541 437 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 MTMR7Q9Y216 660 aa22.68■■□□□ 1.22
SPNS1-203ENST00000334536 ONECUT3O60422 494 aaPredicted RBP22.67■■□□□ 1.22
SPNS1-203ENST00000334536 ECM2O94769 699 aaPredicted RBP22.67■■□□□ 1.22
SPNS1-203ENST00000334536 KRT83P78385 493 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 PDE4DQ08499 809 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 SND1Q7KZF4 910 aaKnown RBP eCLIP22.67■■□□□ 1.221e-8■■■□□ 17.8
SPNS1-203ENST00000334536 ZNF572Q7Z3I7 529 aaPredicted RBP22.67■■□□□ 1.22
SPNS1-203ENST00000334536 SEPT12Q8IYM1 358 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 TUBGCP2Q9BSJ2 902 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 GGA1Q9UJY5 639 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 REXO2Q9Y3B8 237 aaKnown RBP22.67■■□□□ 1.22
SPNS1-203ENST00000334536 TAF1LQ8IZX4 1826 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 UFL1O94874 794 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 ADRA2BP18089 450 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 RIPK1Q13546 671 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 PPP4R3AQ6IN85 833 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 CNNM4Q6P4Q7 775 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 CD302Q8IX05 232 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 CALML4Q96GE6 196 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 SPAG5Q96R06 1193 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 RIOX1Q9H6W3 641 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 GAKO14976 1311 aa22.67■■□□□ 1.22
SPNS1-203ENST00000334536 RHBDL3P58872 404 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 ASIC1P78348 528 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 IFT88Q13099 833 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 APLFQ8IW19 511 aaPredicted RBP22.66■■□□□ 1.22
SPNS1-203ENST00000334536 MFN1Q8IWA4 741 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 RABEP2Q9H5N1 569 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 ZNHIT6Q9NWK9 470 aaKnown RBP22.66■■□□□ 1.22
SPNS1-203ENST00000334536 TRPC6Q9Y210 931 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 LY75O60449 1722 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 CDK5RAP2Q96SN8 1893 aa22.66■■□□□ 1.22
SPNS1-203ENST00000334536 CYLC1P35663 651 aaPredicted RBP22.65■■□□□ 1.22
SPNS1-203ENST00000334536 CRY2Q49AN0 593 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 ANKRD20A8PQ5CZ79 823 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 FIGNQ5HY92 759 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 USP17L2Q6R6M4 530 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 CCDC170Q8IYT3 715 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 REXO1Q8N1G1 1221 aaKnown RBP22.65■■□□□ 1.22
SPNS1-203ENST00000334536 PARD3BQ8TEW8 1205 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 TTYH3Q9C0H2 523 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 STK17AQ9UEE5 414 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 MYH1P12882 1939 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 PLIN4Q96Q06 1357 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 SMNDC1O75940 238 aaKnown RBP eCLIP22.65■■□□□ 1.22
SPNS1-203ENST00000334536 ZBED6P86452 979 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 PRR5LQ6MZQ0 368 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 MIS18BP1Q6P0N0 1132 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 WDR59Q6PJI9 974 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 ARFGAP2Q8N6H7 521 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 TBCKQ8TEA7 893 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 CEP95Q96GE4 821 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 RBM17Q96I25 401 aaKnown RBP22.65■■□□□ 1.22
SPNS1-203ENST00000334536 IRAK4Q9NWZ3 460 aa22.65■■□□□ 1.22
SPNS1-203ENST00000334536 A0A1W2PQJ5 194 aa22.64■■□□□ 1.22
SPNS1-203ENST00000334536 FRMD3A2A2Y4 597 aa22.64■■□□□ 1.22
SPNS1-203ENST00000334536 B4DLN1 442 aa22.64■■□□□ 1.22
SPNS1-203ENST00000334536 COQ9O75208 318 aa22.64■■□□□ 1.22
SPNS1-203ENST00000334536 ABL1P00519 1130 aa22.64■■□□□ 1.22
SPNS1-203ENST00000334536 CDK17Q00537 523 aa22.64■■□□□ 1.22
SPNS1-203ENST00000334536 GLE1Q53GS7 698 aaKnown RBP22.64■■□□□ 1.22
SPNS1-203ENST00000334536 ANKRD40Q6AI12 368 aa22.64■■□□□ 1.22
SPNS1-203ENST00000334536 ZSCAN29Q8IWY8 852 aaPredicted RBP22.64■■□□□ 1.22
SPNS1-203ENST00000334536 CNOT6LQ96LI5 555 aaKnown RBP22.64■■□□□ 1.22
SPNS1-203ENST00000334536 GPR101Q96P66 508 aaPredicted RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms