RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 HADHQ16836 314 aaKnown RBP16.4■□□□□ 0.22
C9orf47-201ENST00000334490 NSRP1Q9H0G5 558 aaKnown RBP16.4■□□□□ 0.22
C9orf47-201ENST00000334490 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 SCAF8Q9UPN6 1271 aaKnown RBP16.4■□□□□ 0.22
C9orf47-201ENST00000334490 MEGF6O75095 1541 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 DDIT3P35638 169 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 MAN2A1Q16706 1144 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 NXF1Q9UBU9 619 aaKnown RBP16.4■□□□□ 0.22
C9orf47-201ENST00000334490 PTPREP23469 700 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 ARFGAP2Q8N6H7 521 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 GIMAP8Q8ND71 665 aaPredicted RBP16.4■□□□□ 0.22
C9orf47-201ENST00000334490 ERO1AQ96HE7 468 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 FAM20AQ96MK3 541 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 IFNB1P01574 187 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 PSMD2Q13200 908 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 CATSPER4Q7RTX7 472 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 FAM151AQ8WW52 585 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 KRT76Q01546 638 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 NEDD9Q14511 834 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 CEP128Q6ZU80 1094 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 STOX1Q6ZVD7 989 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 ANKRD13CQ8N6S4 541 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 TRIM58Q8NG06 486 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 BUB1O43683 1085 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 ATP2C2O75185 946 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 RNF8O76064 485 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 PRELPP51888 382 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 ZBTB16Q05516 673 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 KRT81Q14533 505 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 KMT5BQ4FZB7 885 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 SAMD7Q7Z3H4 446 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 MAIP1Q8WWC4 291 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 MMP19Q99542 508 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 SBK1Q52WX2 424 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 TTBK2Q6IQ55 1244 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 BANK1Q8NDB2 785 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 FAM167AQ96KS9 214 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 CASP14P31944 242 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 COG2Q14746 738 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 LONRF2Q1L5Z9 754 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 TRIM50Q86XT4 487 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 IFT20Q8IY31 132 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 CCDC89Q8N998 374 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
C9orf47-201ENST00000334490 MXI1P50539 228 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 C11orf57Q6ZUT1 292 aaPredicted RBP16.38■□□□□ 0.21
C9orf47-201ENST00000334490 SND1Q7KZF4 910 aaKnown RBP eCLIP16.38■□□□□ 0.21
C9orf47-201ENST00000334490 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
C9orf47-201ENST00000334490 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
C9orf47-201ENST00000334490 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
C9orf47-201ENST00000334490 LRRN2O75325 713 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 GABPAQ06546 454 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 CLUL1Q15846 466 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 FAM149B1Q96BN6 582 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 RAB20Q9NX57 234 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 SYNJ2BP-COX16A0A087WUM0 186 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 IKBKBO14920 756 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 MCPH1Q8NEM0 835 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 CCDC94Q9BW85 323 aaPredicted RBP16.38■□□□□ 0.21
C9orf47-201ENST00000334490 SNX25Q9H3E2 840 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 MYOZ2Q9NPC6 264 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 COX16Q9P0S2 106 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 SAR1BQ9Y6B6 198 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 KCNK3O14649 394 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 NDUFB10O96000 172 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 METTL23Q86XA0 190 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 TCP11Q8WWU5 503 aa16.38■□□□□ 0.21
C9orf47-201ENST00000334490 BSPRYQ5W0U4 402 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 RSRC2Q7L4I2 434 aaKnown RBP16.37■□□□□ 0.21
C9orf47-201ENST00000334490 THNSL1Q8IYQ7 743 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 C7orf31Q8N865 590 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 GABPB2Q8TAK5 448 aaPredicted RBP16.37■□□□□ 0.21
C9orf47-201ENST00000334490 HAUS2Q9NVX0 235 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 CSPG5O95196 566 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 HOXD10P28358 340 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 MSTO1Q9BUK6 570 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 HAUS4Q9H6D7 363 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 SERPINA10Q9UK55 444 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 IPO5O00410 1097 aaKnown RBP16.37■□□□□ 0.21
C9orf47-201ENST00000334490 ALCAMQ13740 583 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 DEFB129Q9H1M3 183 aa16.37■□□□□ 0.21
C9orf47-201ENST00000334490 TNPO2O14787 897 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 ZNF280CQ8ND82 737 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 TMEM39BQ9GZU3 492 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 ZNF609O15014 1411 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 USP32Q8NFA0 1604 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 GNAT1P11488 350 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms