RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 MTMR8Q96EF0 704 aa12.57□□□□□ -0.4
APOBEC3B-201ENST00000333467 AMNQ9BXJ7 453 aa12.57□□□□□ -0.4
APOBEC3B-201ENST00000333467 TRIM5Q9C035 493 aa12.57□□□□□ -0.4
APOBEC3B-201ENST00000333467 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
APOBEC3B-201ENST00000333467 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
APOBEC3B-201ENST00000333467 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
APOBEC3B-201ENST00000333467 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
APOBEC3B-201ENST00000333467 DYNC1LI2O43237 492 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 PRC1O43663 620 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 CYTH3O43739 400 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 ITGB8P26012 769 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 MCF2L2Q86YR7 1114 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 CKAP2LQ8IYA6 745 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 CEP57L1Q8IYX8 460 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 ENGASEQ8NFI3 743 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 IGDCC4Q8TDY8 1250 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 TOX2Q96NM4 488 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 PIGSQ96S52 555 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 BPIFA3Q9BQP9 254 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 MYL10Q9BUA6 226 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 WDR11Q9BZH6 1224 aa12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3B-201ENST00000333467 SCN5AQ14524 2016 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 RBM47A0AV96 593 aaKnown RBP12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 DCDC2CA8MYV0 355 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 DDAH1O94760 285 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 CFBP00751 764 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 LUZP1Q86V48 1076 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 FAM126BQ8IXS8 530 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 SCFD2Q8WU76 684 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 VTI1AQ96AJ9 217 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 TAAR1Q96RJ0 339 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 MAF1Q9H063 256 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 RIOX1Q9H6W3 641 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 TMEM39AQ9NV64 488 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 Q9Y3F1 56 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 PCDHA1Q9Y5I3 950 aa12.55□□□□□ -0.4
APOBEC3B-201ENST00000333467 B4DLN1 442 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 ARVCFO00192 962 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 CPLX1O14810 134 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 AP5Z1O43299 807 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 ARIH2O95376 493 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 RAG1P15918 1043 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 EIF2AK2P19525 551 aaKnown RBP12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 HSD17B4P51659 736 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 GHRHRQ02643 423 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 SNW1Q13573 536 aaKnown RBP12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 IQCB1Q15051 598 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 SYCP1Q15431 976 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 DRC7Q8IY82 874 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 OR6J1Q8NGC5 347 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 KCNF1Q9H3M0 494 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 TBX21Q9UL17 535 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 CDH23Q9H251 3354 aa12.54□□□□□ -0.4
APOBEC3B-201ENST00000333467 EYSQ5T1H1 3165 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 BECN2A8MW95 431 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 ZEB2O60315 1214 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 CABYRO75952 493 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 ME1P48163 572 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 CPT1AP50416 773 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 CDK7P50613 346 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 GSDMDP57764 484 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 PSMC6P62333 389 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 TPM4P67936 248 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 ZRSR1Q15695 479 aaKnown RBP12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 ARHGEF16Q5VV41 709 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 NFXL1Q6ZNB6 911 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 NSUN6Q8TEA1 469 aaKnown RBP12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 COPS5Q92905 334 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 DNAJC25Q9H1X3 360 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 PXMP2Q9NR77 195 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 ORC3Q9UBD5 711 aaPredicted RBP12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 NID2Q14112 1375 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 GRIN2DO15399 1336 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
APOBEC3B-201ENST00000333467 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.4
APOBEC3B-201ENST00000333467 CCDC69A6NI79 296 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms