RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 INF2Q27J81 1249 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 MOXD1Q6UVY6 613 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 CYFIP1Q7L576 1253 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 NEK8Q86SG6 692 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 ELP1O95163 1332 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 MYH15Q9Y2K3 1946 aa23.28■■□□□ 1.32
MRPL40-201ENST00000333130 FAM86B1E9PN63 330 aa23.27■■□□□ 1.32
MRPL40-201ENST00000333130 MMP3P08254 477 aa23.27■■□□□ 1.32
MRPL40-201ENST00000333130 FAM86B2P0C5J1 330 aa23.27■■□□□ 1.32
MRPL40-201ENST00000333130 GCFC2P16383 781 aaKnown RBP23.27■■□□□ 1.32
MRPL40-201ENST00000333130 SP2Q02086 613 aa23.27■■□□□ 1.32
MRPL40-201ENST00000333130 PRR16Q569H4 304 aa23.27■■□□□ 1.32
MRPL40-201ENST00000333130 EARS2Q5JPH6 523 aaKnown RBP23.27■■□□□ 1.32
MRPL40-201ENST00000333130 PKD2L1Q9P0L9 805 aa23.27■■□□□ 1.32
MRPL40-201ENST00000333130 RBM19Q9Y4C8 960 aaKnown RBP23.27■■□□□ 1.32
MRPL40-201ENST00000333130 KIF28PB7ZC32 967 aa23.27■■□□□ 1.31
MRPL40-201ENST00000333130 EDIL3O43854 480 aa23.27■■□□□ 1.31
MRPL40-201ENST00000333130 KCNA2P16389 499 aa23.27■■□□□ 1.31
MRPL40-201ENST00000333130 IRX5P78411 483 aaPredicted RBP23.27■■□□□ 1.31
MRPL40-201ENST00000333130 CXCL17Q6UXB2 119 aa23.27■■□□□ 1.31
MRPL40-201ENST00000333130 CYP2W1Q8TAV3 490 aa23.27■■□□□ 1.31
MRPL40-201ENST00000333130 MTG1Q9BT17 334 aaPredicted RBP23.27■■□□□ 1.31
MRPL40-201ENST00000333130 SEZ6LQ9BYH1 1024 aa23.27■■□□□ 1.31
MRPL40-201ENST00000333130 NFASCO94856 1347 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 ALPK3Q96L96 1907 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 IGLV3-22A0A075B6J6 115 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 A0A0U1RQG5 324 aaPredicted RBP23.26■■□□□ 1.31
MRPL40-201ENST00000333130 SORBS3O60504 671 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 ATN1P54259 1190 aaPredicted RBP23.26■■□□□ 1.31
MRPL40-201ENST00000333130 LETM2Q2VYF4 491 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 NOSTRINQ8IVI9 506 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 SPRYD3Q8NCJ5 442 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 DPF3Q92784 378 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 ZNF577Q9BSK1 485 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 KATNAL1Q9BW62 490 aa23.26■■□□□ 1.31
MRPL40-201ENST00000333130 AGO4Q9HCK5 861 aaKnown RBP23.26■■□□□ 1.31
MRPL40-201ENST00000333130 JPH1Q9HDC5 661 aaPredicted RBP23.26■■□□□ 1.31
MRPL40-201ENST00000333130 MROH7Q68CQ1 1323 aa23.25■■□□□ 1.31
MRPL40-201ENST00000333130 FAM205CA6NFA0 338 aa23.25■■□□□ 1.31
MRPL40-201ENST00000333130 IPO5O00410 1097 aaKnown RBP23.25■■□□□ 1.31
MRPL40-201ENST00000333130 PPFIA4O75335 1185 aa23.25■■□□□ 1.31
MRPL40-201ENST00000333130 PDIA4P13667 645 aaKnown RBP23.25■■□□□ 1.31
MRPL40-201ENST00000333130 PURAQ00577 322 aaKnown RBP23.25■■□□□ 1.31
MRPL40-201ENST00000333130 HSDL1Q3SXM5 330 aa23.25■■□□□ 1.31
MRPL40-201ENST00000333130 SLC39A5Q6ZMH5 540 aa23.25■■□□□ 1.31
MRPL40-201ENST00000333130 TBC1D22BQ9NU19 505 aa23.25■■□□□ 1.31
MRPL40-201ENST00000333130 SLC9A2Q9UBY0 812 aa23.25■■□□□ 1.31
MRPL40-201ENST00000333130 SCN10AQ9Y5Y9 1956 aa23.24■■□□□ 1.31
MRPL40-201ENST00000333130 STX6O43752 255 aa23.24■■□□□ 1.31
MRPL40-201ENST00000333130 EVI5O60447 810 aa23.24■■□□□ 1.31
MRPL40-201ENST00000333130 ARP10275 920 aa23.24■■□□□ 1.31
MRPL40-201ENST00000333130 SP4Q02446 784 aa23.24■■□□□ 1.31
MRPL40-201ENST00000333130 Q4G0T1 1027 aa23.24■■□□□ 1.31
MRPL40-201ENST00000333130 DDX25Q9UHL0 483 aaKnown RBP23.24■■□□□ 1.31
MRPL40-201ENST00000333130 MTMR6Q9Y217 621 aa23.24■■□□□ 1.31
MRPL40-201ENST00000333130 CYP3A7-CYP3A51PA0A087WV96 503 aa23.23■■□□□ 1.31
MRPL40-201ENST00000333130 CCNT1O60563 726 aaKnown RBP23.23■■□□□ 1.31
MRPL40-201ENST00000333130 ATP9AO75110 1047 aa23.23■■□□□ 1.31
MRPL40-201ENST00000333130 CYP3A7P24462 503 aa23.23■■□□□ 1.31
MRPL40-201ENST00000333130 C1orf53Q5VUE5 145 aa23.23■■□□□ 1.31
MRPL40-201ENST00000333130 MCTP1Q6DN14 999 aa23.23■■□□□ 1.31
MRPL40-201ENST00000333130 PPP4R3AQ6IN85 833 aa23.23■■□□□ 1.31
MRPL40-201ENST00000333130 NOL7Q9UMY1 257 aaKnown RBP23.23■■□□□ 1.31
MRPL40-201ENST00000333130 NR2E3Q9Y5X4 410 aa23.23■■□□□ 1.31
MRPL40-201ENST00000333130 VPS37CA5D8V6 355 aaPredicted RBP23.22■■□□□ 1.31
MRPL40-201ENST00000333130 TDP2O95551 362 aa23.22■■□□□ 1.31
MRPL40-201ENST00000333130 HOXD8P13378 290 aaPredicted RBP23.22■■□□□ 1.31
MRPL40-201ENST00000333130 MBOAT7Q96N66 472 aa23.22■■□□□ 1.31
MRPL40-201ENST00000333130 ZNF215Q9UL58 517 aaPredicted RBP23.22■■□□□ 1.31
MRPL40-201ENST00000333130 ATP11BQ9Y2G3 1177 aa23.22■■□□□ 1.31
MRPL40-201ENST00000333130 DNAH12Q6ZR08 3092 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 MARCH6O60337 910 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 RTP1P59025 263 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 ITGA7Q13683 1181 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 SNX17Q15036 470 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 LRRC26Q2I0M4 334 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 SEPT1Q8WYJ6 367 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 LENG9Q96B70 501 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 GPR20Q99678 358 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 KAT6AQ92794 2004 aa23.21■■□□□ 1.31
MRPL40-201ENST00000333130 MYH9P35579 1960 aaKnown RBP23.2■■□□□ 1.3
MRPL40-201ENST00000333130 ARVCFO00192 962 aa23.2■■□□□ 1.3
MRPL40-201ENST00000333130 GAS7O60861 476 aa23.2■■□□□ 1.3
MRPL40-201ENST00000333130 ZNF286BP0CG31 522 aa23.2■■□□□ 1.3
MRPL40-201ENST00000333130 KRT76Q01546 638 aa23.2■■□□□ 1.3
MRPL40-201ENST00000333130 ITGB3BPQ13352 177 aaPredicted RBP23.2■■□□□ 1.3
MRPL40-201ENST00000333130 RIT2Q99578 217 aa23.2■■□□□ 1.3
MRPL40-201ENST00000333130 DCDC2CA8MYV0 355 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 DDX39AO00148 427 aaKnown RBP23.19■■□□□ 1.3
MRPL40-201ENST00000333130 TLR3O15455 904 aaKnown RBP23.19■■□□□ 1.3
MRPL40-201ENST00000333130 MSH4O15457 936 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 F2P00734 622 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 DDIT3P35638 169 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 TCF7P36402 384 aaPredicted RBP23.19■■□□□ 1.3
MRPL40-201ENST00000333130 TRAPPC10P48553 1259 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 CHMP4BP1P59074 171 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 LRCH2Q5VUJ6 765 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 TEKT3Q9BXF9 490 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 AZI2Q9H6S1 392 aa23.19■■□□□ 1.3
MRPL40-201ENST00000333130 BAG4O95429 457 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms