RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 GRID2IPA4D2P6 1211 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 MDH1P40925 334 aaKnown RBP25.99■■□□□ 1.75
TSKU-201ENST00000333090 RAPGEF1Q13905 1077 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 MEI1Q5TIA1 1274 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 TXNRD3Q86VQ6 643 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 NUDT12Q9BQG2 462 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 ADAMTS1Q9UHI8 967 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 ATP6V0A2Q9Y487 856 aa25.99■■□□□ 1.75
TSKU-201ENST00000333090 FSBPO95073 299 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 HDLBPQ00341 1268 aaKnown RBP25.98■■□□□ 1.75
TSKU-201ENST00000333090 KCNK18Q7Z418 384 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 NLRP14Q86W24 1093 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 MYCBPAPQ8TBZ2 947 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 SNX29Q8TEQ0 813 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 RAD54LQ92698 747 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 CABS1Q96KC9 395 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 SAP30BPQ9UHR5 308 aaKnown RBP25.98■■□□□ 1.75
TSKU-201ENST00000333090 A0A087X0T9 212 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 SLC37A4O43826 429 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 FAM228BP0C875 321 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 TMEM266Q2M3C6 531 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 MYOCDQ8IZQ8 938 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 MTMR9Q96QG7 549 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 PIGSQ96S52 555 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 NUCKS1Q9H1E3 243 aaKnown RBP25.98■■□□□ 1.75
TSKU-201ENST00000333090 RIC8AQ9NPQ8 531 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 PCDHGC5Q9Y5F6 944 aa25.98■■□□□ 1.75
TSKU-201ENST00000333090 LAMB2P55268 1798 aa25.97■■□□□ 1.75
TSKU-201ENST00000333090 HMGB1P1B2RPK0 211 aaPredicted RBP25.97■■□□□ 1.75
TSKU-201ENST00000333090 E7EVH7 732 aa25.97■■□□□ 1.75
TSKU-201ENST00000333090 FKBP3Q00688 224 aaKnown RBP25.97■■□□□ 1.75
TSKU-201ENST00000333090 SLC18A3Q16572 532 aa25.97■■□□□ 1.75
TSKU-201ENST00000333090 TGFBRAP1Q8WUH2 860 aa25.97■■□□□ 1.75
TSKU-201ENST00000333090 GOLGA6L10A6NI86 522 aa25.97■■□□□ 1.75
TSKU-201ENST00000333090 RPS8P62241 208 aaKnown RBP25.97■■□□□ 1.75
TSKU-201ENST00000333090 TNNC1P63316 161 aa25.97■■□□□ 1.75
TSKU-201ENST00000333090 ITGB3BPQ13352 177 aaPredicted RBP25.97■■□□□ 1.75
TSKU-201ENST00000333090 LOC102724159A0A0B4J2E5 919 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 TDP2O95551 362 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 PWP2Q15269 919 aaKnown RBP25.96■■□□□ 1.75
TSKU-201ENST00000333090 EMC10Q5UCC4 262 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 USP38Q8NB14 1042 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 PPANQ9NQ55 473 aaKnown RBP25.96■■□□□ 1.75
TSKU-201ENST00000333090 RASA1P20936 1047 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 DIXDC1Q155Q3 683 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 FAM133AQ8N9E0 248 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 SYN2Q92777 582 aaPredicted RBP25.96■■□□□ 1.75
TSKU-201ENST00000333090 TBC1D7Q9P0N9 293 aa25.96■■□□□ 1.75
TSKU-201ENST00000333090 SETQ01105 290 aaPredicted RBP25.95■■□□□ 1.75
TSKU-201ENST00000333090 KLHL30Q0D2K2 578 aa25.95■■□□□ 1.75
TSKU-201ENST00000333090 IFT88Q13099 833 aa25.95■■□□□ 1.75
TSKU-201ENST00000333090 KRT79Q5XKE5 535 aa25.95■■□□□ 1.75
TSKU-201ENST00000333090 PROM2Q8N271 834 aa25.95■■□□□ 1.75
TSKU-201ENST00000333090 TAF4BQ92750 862 aa25.95■■□□□ 1.75
TSKU-201ENST00000333090 SPATA31A5Q5VU36 1347 aa25.95■■□□□ 1.74
TSKU-201ENST00000333090 SPATA31A7Q8IWB4 1347 aa25.95■■□□□ 1.74
TSKU-201ENST00000333090 KCNK3O14649 394 aa25.95■■□□□ 1.74
TSKU-201ENST00000333090 CLSTN1O94985 981 aa25.95■■□□□ 1.74
TSKU-201ENST00000333090 FXR2P51116 673 aaKnown RBP eCLIP25.95■■□□□ 1.74
TSKU-201ENST00000333090 UBA5Q9GZZ9 404 aa25.95■■□□□ 1.74
TSKU-201ENST00000333090 TAF1DQ9H5J8 278 aaPredicted RBP25.95■■□□□ 1.74
TSKU-201ENST00000333090 HSPA9P38646 679 aaKnown RBP25.94■■□□□ 1.74
TSKU-201ENST00000333090 PTPROQ16827 1216 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 MAPKAPK5Q8IW41 473 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 OR2W6PQ8NHA6 318 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 RAB34Q9BZG1 259 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 FAM107AO95990 144 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 SPTY2D1Q68D10 685 aaPredicted RBP25.94■■□□□ 1.74
TSKU-201ENST00000333090 ARHGAP27Q6ZUM4 889 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 YTHDF3Q7Z739 585 aaKnown RBP25.94■■□□□ 1.74
TSKU-201ENST00000333090 PAGR1Q9BTK6 254 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 GOLPH3Q9H4A6 298 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 ERVK-9P63128 1117 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 COASYQ13057 564 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 PSMD2Q13200 908 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 ZCWPW2Q504Y3 356 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 NELFCDQ8IXH7 590 aa25.94■■□□□ 1.74
TSKU-201ENST00000333090 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.94■■□□□ 1.74
TSKU-201ENST00000333090 SSBP05455 408 aaKnown RBP eCLIP25.93■■□□□ 1.74
TSKU-201ENST00000333090 LDHBP07195 334 aaKnown RBP25.93■■□□□ 1.74
TSKU-201ENST00000333090 TMBIM4Q9HC24 238 aa25.93■■□□□ 1.74
TSKU-201ENST00000333090 ROBO3Q96MS0 1386 aa25.93■■□□□ 1.74
TSKU-201ENST00000333090 GCOM1H8Y6P7 765 aaPredicted RBP25.93■■□□□ 1.74
TSKU-201ENST00000333090 MYZAPP0CAP1 466 aa25.93■■□□□ 1.74
TSKU-201ENST00000333090 NT5C2P49902 561 aa25.93■■□□□ 1.74
TSKU-201ENST00000333090 RPS6KA1Q15418 735 aa25.93■■□□□ 1.74
TSKU-201ENST00000333090 KCTD19Q17RG1 926 aaPredicted RBP25.93■■□□□ 1.74
TSKU-201ENST00000333090 HSD17B3P37058 310 aa25.92■■□□□ 1.74
TSKU-201ENST00000333090 ORC2Q13416 577 aaPredicted RBP25.92■■□□□ 1.74
TSKU-201ENST00000333090 PROCA1Q8NCQ7 364 aaPredicted RBP25.92■■□□□ 1.74
TSKU-201ENST00000333090 C1orf131Q8NDD1 294 aaKnown RBP25.92■■□□□ 1.74
TSKU-201ENST00000333090 EYA3Q99504 573 aa25.92■■□□□ 1.74
TSKU-201ENST00000333090 FGFBP2Q9BYJ0 223 aa25.92■■□□□ 1.74
TSKU-201ENST00000333090 FAM26FQ5R3K3 315 aa25.92■■□□□ 1.74
TSKU-201ENST00000333090 DDX42Q86XP3 938 aaKnown RBP eCLIP25.92■■□□□ 1.74
TSKU-201ENST00000333090 GPR101Q96P66 508 aaPredicted RBP25.92■■□□□ 1.74
TSKU-201ENST00000333090 ISCUQ9H1K1 167 aa25.92■■□□□ 1.74
TSKU-201ENST00000333090 ECM1Q16610 540 aa25.91■■□□□ 1.74
TSKU-201ENST00000333090 LRRC27Q9C0I9 530 aa25.91■■□□□ 1.74
TSKU-201ENST00000333090 PLCB1Q9NQ66 1216 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms