RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PDE8BO95263 885 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 RNASE9P60153 205 aaKnown RBP26.66■■□□□ 1.86
SOX1-201ENST00000330949 NAB2Q15742 525 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 TAF4BQ92750 862 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 CNKSR1Q969H4 720 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 SLC5A4Q9NY91 659 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 TNKSO95271 1327 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 DCCP43146 1447 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 GOLGA6L10A0A0M3HER8 536 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 ZNF317Q96PQ6 595 aaPredicted RBP26.66■■□□□ 1.86
SOX1-201ENST00000330949 MOV10L1Q9BXT6 1211 aaKnown RBP26.66■■□□□ 1.86
SOX1-201ENST00000330949 PANK4Q9NVE7 773 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 SAMD15Q9P1V8 674 aa26.66■■□□□ 1.86
SOX1-201ENST00000330949 DCDC2CA8MYV0 355 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 EHHADHQ08426 723 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 BLMHQ13867 455 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 SEC23AQ15436 765 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 TDRD12Q587J7 1177 aaKnown RBP26.65■■□□□ 1.86
SOX1-201ENST00000330949 STAG2Q8N3U4 1231 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 SMIM22K7EJ46 135 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 IRF6O14896 467 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 TRPM8Q7Z2W7 1104 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 PIGWQ7Z7B1 504 aa26.65■■□□□ 1.86
SOX1-201ENST00000330949 GNAT2P19087 354 aa26.64■■□□□ 1.86
SOX1-201ENST00000330949 TRAF1Q13077 416 aa26.64■■□□□ 1.86
SOX1-201ENST00000330949 BAP1Q92560 729 aa26.64■■□□□ 1.86
SOX1-201ENST00000330949 EDEM3Q9BZQ6 932 aa26.64■■□□□ 1.86
SOX1-201ENST00000330949 KCNMB3Q9NPA1 279 aa26.64■■□□□ 1.86
SOX1-201ENST00000330949 PRPHP41219 470 aa26.64■■□□□ 1.85
SOX1-201ENST00000330949 EIF3BP55884 814 aaKnown RBP26.64■■□□□ 1.85
SOX1-201ENST00000330949 PDXDC1Q6P996 788 aa26.64■■□□□ 1.85
SOX1-201ENST00000330949 TLCD1Q96CP7 247 aa26.64■■□□□ 1.85
SOX1-201ENST00000330949 CALR3Q96L12 384 aaKnown RBP26.64■■□□□ 1.85
SOX1-201ENST00000330949 CATIPQ7Z7H3 387 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 AFF2P51816 1311 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 UBR2Q8IWV8 1755 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 PLEKHA8P1O95397 391 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 FESP07332 822 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 UQCRFS1P1P0C7P4 283 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 UBA7P41226 1012 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 PDE4DQ08499 809 aa26.63■■□□□ 1.85
SOX1-201ENST00000330949 AHCYL1O43865 530 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 NQO1P15559 274 aaKnown RBP26.62■■□□□ 1.85
SOX1-201ENST00000330949 NLRP5P59047 1200 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 MAP3K12Q12852 859 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 SLC9C1Q4G0N8 1177 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 ARHGAP27Q6ZUM4 889 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 TMC4Q7Z404 712 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 MAGEF1Q9HAY2 307 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 TNS2Q63HR2 1409 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 BHMG1C9JSJ3 638 aaPredicted RBP26.62■■□□□ 1.85
SOX1-201ENST00000330949 AP1G2O75843 785 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 IFI16Q16666 785 aaKnown RBP26.62■■□□□ 1.85
SOX1-201ENST00000330949 MAN2A1Q16706 1144 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 DTHD1Q6ZMT9 781 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 TMC3Q7Z5M5 1100 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 DDX42Q86XP3 938 aaKnown RBP eCLIP26.62■■□□□ 1.85
SOX1-201ENST00000330949 C4orf32Q8N8J7 132 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 MDM1Q8TC05 714 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 ESR2Q92731 530 aa26.62■■□□□ 1.85
SOX1-201ENST00000330949 SART1O43290 800 aaKnown RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 MMEP08473 750 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 ARID4AP29374 1257 aaPredicted RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 SEPT2Q15019 361 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 HGSNATQ68CP4 663 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 SCFD2Q8WU76 684 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 YIPF3Q9GZM5 350 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 NEUROG2Q9H2A3 272 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 BTG4Q9NY30 223 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 PACSIN2Q9UNF0 486 aaPredicted RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 ZNF335Q9H4Z2 1342 aaPredicted RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 RASGRF1Q13972 1273 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 FAM133BQ5BKY9 247 aaKnown RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 NUCKS1Q9H1E3 243 aaKnown RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 CUEDC2Q9H467 287 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 ABCB11O95342 1321 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 TRIM28Q13263 835 aaKnown RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 MKRN4PQ13434 485 aaPredicted RBP26.61■■□□□ 1.85
SOX1-201ENST00000330949 HOOK3Q86VS8 718 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 VGLL2Q8N8G2 317 aa26.61■■□□□ 1.85
SOX1-201ENST00000330949 F8VZ95 297 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 CALM1P0DP23 149 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 CALM2P0DP24 149 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 CALM3P0DP25 149 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 NEFHP12036 1026 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 KLRC1P26715 233 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 BCAMP50895 628 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 CCDC178Q5BJE1 867 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 DZIP3Q86Y13 1208 aaKnown RBP26.6■■□□□ 1.85
SOX1-201ENST00000330949 SPATA5Q8NB90 893 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 PBKQ96KB5 322 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 CCSER1Q9C0I3 900 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 NKRFO15226 690 aaKnown RBP eCLIP26.6■■□□□ 1.85
SOX1-201ENST00000330949 STK4Q13043 487 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 RPS6KA1Q15418 735 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 GPIHBP1Q8IV16 184 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 ANKRD27Q96NW4 1050 aa26.6■■□□□ 1.85
SOX1-201ENST00000330949 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.6■■□□□ 1.85
SOX1-201ENST00000330949 KCNK3O14649 394 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 NSRP1Q9H0G5 558 aaKnown RBP26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms