RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 HSPD1P10809 573 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SCG2P13521 617 aa13.75□□□□□ -0.21
RAB11FIP1-202ENST00000330843 THOC5Q13769 683 aaKnown RBP13.75□□□□□ -0.21
RAB11FIP1-202ENST00000330843 FAM133AQ8N9E0 248 aa13.75□□□□□ -0.21
RAB11FIP1-202ENST00000330843 BRD8Q9H0E9 1235 aa13.75□□□□□ -0.21
RAB11FIP1-202ENST00000330843 C11orf57Q6ZUT1 292 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 DEPTORQ8TB45 409 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SLC26A7Q8TE54 656 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 XAGE2Q96GT9 111 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 NAF1Q96HR8 494 aaKnown RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SFI1A8K8P3 1242 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 MYO1FO00160 1098 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ZSCAN9O15535 394 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 BRD1O95696 1058 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 NHEJ1Q9H9Q4 299 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 RNF103-CHMP3A0A140T963 221 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PGRMC1O00264 195 aaKnown RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TMPRSS15P98073 1019 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 EPM2AIP1Q7L775 607 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 KDM3AQ9Y4C1 1321 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GOLGA8SH3BPF8 625 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GOLGA8MH3BSY2 632 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TTI1O43156 1089 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PCDHA12Q9UN75 941 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ZBTB7BO15156 539 aaPredicted RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 VAMP4O75379 141 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 HSPA4LO95757 839 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 MECOMQ03112 1051 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TAGAPQ8N103 731 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 AHI1Q8N157 1196 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GIPC2Q8TF65 315 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ZSCAN32Q9NX65 697 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SGSM2O43147 1006 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SCP2P22307 547 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SERPINB10P48595 397 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 DR1Q01658 176 aa13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 REXO1Q8N1G1 1221 aaKnown RBP13.74□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TAF5LO75529 589 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 NSUN2Q08J23 767 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PDZD4Q76G19 769 aaPredicted RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GJA10Q969M2 543 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CHMP2BQ9UQN3 213 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SLC1A4P43007 532 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PUM3Q15397 648 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GRAMD1CQ8IYS0 662 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PYROXD1Q8WU10 500 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 NT5C3AQ9H0P0 336 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PICK1Q9NRD5 415 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SUGT1Q9Y2Z0 365 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 MAGOHP61326 146 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TBCCQ15814 346 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 LRRC37BQ96QE4 947 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 DBNDD2Q9BQY9 259 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TNNC2P02585 160 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GCFC2P16383 781 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ELF1P32519 619 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 MDM2Q00987 491 aaPredicted RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ARMCX5Q6P1M9 558 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 OLFML1Q6UWY5 402 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CCDC103Q8IW40 242 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PCDHA13Q9Y5I0 950 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CCDC151A5D8V7 595 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ESRRBO95718 433 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 G2E3Q7L622 706 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CALN1Q9BXU9 219 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ADNPQ9H2P0 1102 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CDV3Q9UKY7 258 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 EPRSP07814 1512 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 KRT1P04264 644 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GUCY1A3Q02108 690 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SMAD1Q15797 465 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TMEM154Q6P9G4 183 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 FAM178BQ8IXR5 827 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 TMEM60Q9H2L4 133 aa13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ZCCHC17Q9NP64 241 aaKnown RBP13.73□□□□□ -0.21
RAB11FIP1-202ENST00000330843 LZTS3O60299 673 aaPredicted RBP13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 GFPT2O94808 682 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SOX5P35711 763 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 SPARCL1Q14515 664 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 DPCR1Q3MIW9 517 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 ORC4O43929 436 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 HSPH1Q92598 858 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 PCP4L1A6NKN8 68 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 DEAF1O75398 565 aaPredicted RBP13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
RAB11FIP1-202ENST00000330843 CDH24Q86UP0 819 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms