RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RNF207Q6ZRF8 634 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 ATP8B4Q8TF62 1192 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 HAUS7Q99871 368 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 SMOC2Q9H3U7 446 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 PLIN4Q96Q06 1357 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 FAM208BQ5VWN6 2430 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 RPS6P62753 249 aaKnown RBP17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 RSPO4Q2I0M5 234 aaPredicted RBP17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 CWF19L1Q69YN2 538 aaKnown RBP17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 VN1R2Q8NFZ6 395 aa17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 POF1BQ8WVV4 589 aa17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 ZNF689Q96CS4 500 aaPredicted RBP17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 NEK1Q96PY6 1258 aa17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 RANBP17Q9H2T7 1088 aaKnown RBP17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 TLE6Q9H808 572 aa17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 ZNF287Q9HBT7 754 aa17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 NR2E1Q9Y466 385 aa17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 KIAA1671Q9BY89 1806 aa17.46■□□□□ 0.39
CTHRC1-201ENST00000330295 CTSHP09668 335 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 UBE3CQ15386 1083 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 SEPT14Q6ZU15 432 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 FLCNQ8NFG4 579 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 CYP2W1Q8TAV3 490 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 CLEC4DQ8WXI8 215 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 COL26A1Q96A83 441 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 S1PR5Q9H228 398 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 PAG1Q9NWQ8 432 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 RALYQ9UKM9 306 aaKnown RBP17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 MYH7P12883 1935 aa17.45■□□□□ 0.38
CTHRC1-201ENST00000330295 PER2O15055 1255 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 CAND2O75155 1236 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 TRIM27P14373 513 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 AOC1P19801 751 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 KLHL23Q8NBE8 558 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 EMID1Q96A84 441 aaPredicted RBP17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 TSHZ2Q9NRE2 1034 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 MRPL42Q9Y6G3 142 aaKnown RBP17.44■□□□□ 0.38
CTHRC1-201ENST00000330295 FRYLO94915 3013 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 KIAA1217Q5T5P2 1943 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 FSD2A1L4K1 749 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 PI15O43692 258 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 TSPY3P0CV98 308 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 TSPY8P0CW00 308 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 MS4A1P11836 297 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 GIMAP6Q6P9H5 292 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 ERC1Q8IUD2 1116 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 DTWD2Q8NBA8 298 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 PPTC7Q8NI37 304 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 RUBCNQ92622 972 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 ATP6V0A1Q93050 837 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 C1orf115Q9H7X2 142 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 TTC3P53804 2025 aa17.43■□□□□ 0.38
CTHRC1-201ENST00000330295 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
CTHRC1-201ENST00000330295 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
CTHRC1-201ENST00000330295 IL1RAPL2Q9NP60 686 aa17.42■□□□□ 0.38
CTHRC1-201ENST00000330295 R4GN57 208 aa17.42■□□□□ 0.38
CTHRC1-201ENST00000330295 PLXNA4Q9HCM2 1894 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 FASNP49327 2511 aaKnown RBP17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 C17orf102A2RUQ5 167 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 C2CD4DB7Z1M9 353 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 DGKIO75912 1065 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 SRGAP2BP0DMP2 458 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 ARP10275 920 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 DUSP6Q16828 381 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 KIAA0319Q5VV43 1072 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 DCLK2Q8N568 766 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 CDCA3Q99618 268 aaPredicted RBP17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 DDX41Q9UJV9 622 aaKnown RBP17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 EXOC6BQ9Y2D4 811 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 MYH7BA7E2Y1 1941 aa17.41■□□□□ 0.38
CTHRC1-201ENST00000330295 TREHO43280 583 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 HOXD8P13378 290 aaPredicted RBP17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 HOXC8P31273 242 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 ACAP1Q15027 740 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 ANKRD54Q6NXT1 300 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 SYCE2Q6PIF2 218 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 TMEM184AQ6ZMB5 413 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 CMTR2Q8IYT2 770 aaKnown RBP17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 MICAL1Q8TDZ2 1067 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 STRBPQ96SI9 672 aaKnown RBP17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 RTP3Q9BQQ7 232 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 APOL5Q9BWW9 433 aa17.4■□□□□ 0.38
CTHRC1-201ENST00000330295 PPFIA4O75335 1185 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 ASGR2P07307 311 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 NPR3P17342 541 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 SDHBP21912 280 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 SLC16A2P36021 539 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 TECP42680 631 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 ATXN1P54253 815 aaKnown RBP17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 TFAP4Q01664 338 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 CCDC96Q2M329 555 aa17.39■□□□□ 0.37
CTHRC1-201ENST00000330295 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms