RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 LINC01356Q8N9X3 169 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 RCBTB1Q8NDN9 531 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 ZNF669Q96BR6 464 aaPredicted RBP2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 C1orf159Q96HA4 380 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 BCAS3Q9H6U6 928 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 PLA2G2DQ9UNK4 145 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 SIT1Q9Y3P8 196 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 PCDHA2Q9Y5H9 948 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 X6R8D5 127 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 FAM135BQ49AJ0 1406 aa2.51□□□□□ -2.01
CCDC144A-201ENST00000328495 TRIM13O60858 407 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 MC3RP41968 323 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 CACNB2Q08289 660 aaPredicted RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 ETV3LQ6ZN32 361 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 ZC3H18Q86VM9 953 aaKnown RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 NLRP10Q86W26 655 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 MARCH10Q8NA82 808 aaPredicted RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 DDX11Q96FC9 970 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 KCNC2Q96PR1 638 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 YIPF4Q9BSR8 244 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 HIRIP3Q9BW71 556 aaPredicted RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 ARHGEF12Q9NZN5 1544 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 TRAV20A0A0B4J274 112 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 CAPNS1P04632 268 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 CYP2C8P10632 490 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 FGFR1P11362 822 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 GRIA2P42262 883 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 RSPO2Q6UXX9 243 aaPredicted RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 SMARCC2Q8TAQ2 1214 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 FNIP1Q8TF40 1166 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 ARMC5Q96C12 935 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 EPB41L1Q9H4G0 881 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 LUC7LQ9NQ29 371 aaKnown RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 GPR27Q9NS67 375 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 CLDND1Q9NY35 253 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 POLR1AO95602 1720 aaPredicted RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 EFCAB6Q5THR3 1501 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 SGSM2O43147 1006 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 DLX3O60479 287 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 MAFKO60675 156 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 PLA2G1BP04054 148 aaKnown RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 HTRA3P83110 453 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 VMACQ2NL98 169 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 DENND5AQ6IQ26 1287 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 USP53Q70EK8 1073 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 DPH6Q7L8W6 267 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 MIB1Q86YT6 1006 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 NGRNQ9NPE2 291 aaKnown RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 SIRPGQ9P1W8 387 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 FBXL7Q9UJT9 491 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 PALD1Q9ULE6 856 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 ZNF652Q9Y2D9 606 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 NPFFR2Q9Y5X5 522 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 CASZ1Q86V15 1759 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 CEP170Q5SW79 1584 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CCDC144A-201ENST00000328495 HGSO14964 777 aaPredicted RBP2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 PDPK1O15530 556 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 PRODHO43272 600 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 DGKIO75912 1065 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 LCP1P13796 627 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 HOXA5P20719 270 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 GTF2F1P35269 517 aaKnown RBP eCLIP2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 CTSWP56202 376 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 IFRD2Q12894 506 aaPredicted RBP2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 RASGRF1Q13972 1273 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 MTERF2Q49AM1 385 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 NSMFQ6X4W1 530 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 MILR1Q7Z6M3 343 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 SAPCD2Q86UD0 394 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 DCAF4Q8WV16 495 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 PHF20Q9BVI0 1012 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 ARHGEF4Q9NR80 690 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 MSRB2Q9Y3D2 182 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 ARNTLO00327 626 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 FFAR3O14843 346 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 SMARCA5O60264 1052 aaPredicted RBP2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 PABPC1P11940 636 aaKnown RBP2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 SF3A1Q15459 793 aaKnown RBP2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 VWA3BQ502W6 1294 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 STEAP3Q658P3 488 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 LILRA6Q6PI73 481 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 FAM126BQ8IXS8 530 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 ZFYVE21Q9BQ24 234 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 PCDHB4Q9Y5E5 795 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 WDR7Q9Y4E6 1490 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 ADAMTS20P59510 1910 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 CCDC85CA6NKD9 419 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 KRIT1O00522 736 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 C8BP07358 591 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 KCNC1P48547 511 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 EMC4Q5J8M3 183 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 LIPIQ6XZB0 460 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 TTLL7Q6ZT98 887 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 PHOSPHO1Q8TCT1 267 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 ZBTB8AQ96BR9 441 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 IPO9Q96P70 1041 aaKnown RBP2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 SPATA9Q9BWV2 254 aa2.49□□□□□ -2.01
CCDC144A-201ENST00000328495 CCDC113Q9H0I3 377 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms