RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 PRCCQ92733 491 aaPredicted RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 PAIP2Q9BPZ3 127 aaKnown RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 CNOT8Q9UFF9 292 aaKnown RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 RTL9Q8NET4 1388 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 C4AP0C0L4 1744 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 DDX60Q8IY21 1712 aaKnown RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 USP17L3A6NCW0 530 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 USP17L4A6NCW7 530 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 PRPF3O43395 683 aaKnown RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 LGR5O75473 907 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 FAM107AO95990 144 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 ACTN1P12814 892 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 SCTRP47872 440 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 TNNC1P63316 161 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 SLC9C1Q4G0N8 1177 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 DCAF17Q5H9S7 520 aaPredicted RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 SMIM5Q71RC9 77 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 USP17L1Q7RTZ2 530 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 FAM114A1Q8IWE2 563 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 ANKRD42Q8N9B4 389 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 LRRC15Q8TF66 581 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 STAG1Q8WVM7 1258 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 RAPGEF5Q92565 580 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 TRIM6Q9C030 488 aaPredicted RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 CHORDC1Q9UHD1 332 aaPredicted RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 SAP30BPQ9UHR5 308 aaKnown RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 QSER1Q2KHR3 1735 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 BICDL2A1A5D9 508 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 POTEMA6NI47 508 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 MAP2K1Q02750 393 aaPredicted RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 ZNF211Q13398 564 aaPredicted RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 VWA3BQ502W6 1294 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 SFMBT2Q5VUG0 894 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 TMTC3Q6ZXV5 915 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 SLC44A5Q8NCS7 719 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 NSMCE1Q8WV22 266 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 RSRC1Q96IZ7 334 aaKnown RBP10.47□□□□□ -0.73
DDX53-201ENST00000327968 THAP9Q9H5L6 903 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 KIF9Q9HAQ2 790 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 CCDC87Q9NVE4 849 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 ARAP2Q8WZ64 1704 aa10.47□□□□□ -0.73
DDX53-201ENST00000327968 WDR19Q8NEZ3 1342 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 LOC102724428A0A0B4J2F2 783 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 TTI1O43156 1089 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 ERFP50548 548 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 SIK1P57059 783 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 ERVK-9P63128 1117 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 TFAP4Q01664 338 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 ZNF772Q68DY9 489 aaPredicted RBP10.46□□□□□ -0.73
DDX53-201ENST00000327968 INTS5Q6P9B9 1019 aaKnown RBP10.46□□□□□ -0.73
DDX53-201ENST00000327968 GIGYF2Q6Y7W6 1299 aaKnown RBP10.46□□□□□ -0.73
DDX53-201ENST00000327968 NLRP10Q86W26 655 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 ARFGAP2Q8N6H7 521 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 CCDC63Q8NA47 563 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.46□□□□□ -0.73
DDX53-201ENST00000327968 FBXO3Q9UK99 471 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 TNS1Q9HBL0 1735 aaKnown RBP10.46□□□□□ -0.73
DDX53-201ENST00000327968 A0A087X0T9 212 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 FOXO6A8MYZ6 492 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 FSBPO95073 299 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 FAM228BP0C875 321 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 IGHMBP2P38935 993 aaKnown RBP10.46□□□□□ -0.73
DDX53-201ENST00000327968 SMTNP53814 917 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 PLTPP55058 493 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
DDX53-201ENST00000327968 KDM7AQ6ZMT4 941 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 MRRFQ96E11 262 aaKnown RBP10.46□□□□□ -0.73
DDX53-201ENST00000327968 CALML4Q96GE6 196 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 NEUROG2Q9H2A3 272 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 SEMA6BQ9H3T3 888 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 ZBTB1Q9Y2K1 713 aa10.46□□□□□ -0.73
DDX53-201ENST00000327968 CASZ1Q86V15 1759 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 A0A1W2PQC6 194 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 DIAPH2O60879 1101 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 USP17L8P0C7I0 530 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 TROAPQ12815 778 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 IQCKQ8N0W5 287 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 MSL3Q8N5Y2 521 aaKnown RBP10.46□□□□□ -0.74
DDX53-201ENST00000327968 RETREG2Q8NC44 543 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 ADAM33Q9BZ11 813 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 KCNK9Q9NPC2 374 aa10.46□□□□□ -0.74
DDX53-201ENST00000327968 MIIPQ5JXC2 388 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 TRIM9Q9C026 710 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 KCNG1Q9UIX4 513 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 SPEF2Q9C093 1822 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 SART1O43290 800 aaKnown RBP10.45□□□□□ -0.74
DDX53-201ENST00000327968 LONP1P36776 959 aaKnown RBP10.45□□□□□ -0.74
DDX53-201ENST00000327968 SARNPP82979 210 aaKnown RBP10.45□□□□□ -0.74
DDX53-201ENST00000327968 ZBTB10Q96DT7 871 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 TMEM260Q9NX78 707 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 PLAGL2Q9UPG8 496 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 UBR3Q6ZT12 1888 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 A8MUI8 341 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 SKOR1P84550 965 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 ITGB3BPQ13352 177 aaPredicted RBP10.45□□□□□ -0.74
DDX53-201ENST00000327968 ANKRD20A8PQ5CZ79 823 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 SV2BQ7L1I2 683 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 GIMAP8Q8ND71 665 aaPredicted RBP10.45□□□□□ -0.74
DDX53-201ENST00000327968 SLC17A8Q8NDX2 589 aa10.45□□□□□ -0.74
DDX53-201ENST00000327968 GDAP1Q8TB36 358 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms