RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 SNX29Q8TEQ0 813 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 NUDT12Q9BQG2 462 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 PKD2L1Q9P0L9 805 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 NFASCO94856 1347 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 TRPA1O75762 1119 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 CTGFP29279 349 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 RGS2P41220 211 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 E2F4Q16254 413 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 HAUS3Q68CZ6 603 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 NPLOC4Q8TAT6 608 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 SDF4Q9BRK5 362 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 UNC45AQ9H3U1 944 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 SYNGAP1Q96PV0 1343 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 HYIQ5T013 277 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 KCNV1Q6PIU1 500 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 KRBA2Q6ZNG9 492 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 SEPT14Q6ZU15 432 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 PDILTQ8N807 584 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 RASSF8Q8NHQ8 419 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 CALML4Q96GE6 196 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 APBA2Q99767 749 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 VTA1Q9NP79 307 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 TCEAL9Q9UHQ7 104 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 GJD2Q9UKL4 321 aa11.52□□□□□ -0.57
VIPAS39-201ENST00000327028 CASP8AP2Q9UKL3 1982 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 CTAGE5O15320 804 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 ATP9AO75110 1047 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 PSMC4P43686 418 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 KRT76Q01546 638 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 SP3Q02447 781 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 GRB10Q13322 594 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 FBXO16Q8IX29 292 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 IQUBQ8NA54 791 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 DHX58Q96C10 678 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 TRIM47Q96LD4 638 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 SENP7Q9BQF6 1050 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 PANK2Q9BZ23 570 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 DOCK5Q9H7D0 1870 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 EML1O00423 815 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 CHMP2AO43633 222 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 TGFB3P10600 412 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 PLCG1P19174 1290 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 CCT6AP40227 531 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 STAT6P42226 847 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 C1QTNF8P60827 252 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 KIF22Q14807 665 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 TMEM119Q4V9L6 283 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 RRAGBQ5VZM2 374 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 ELOA2Q8IYF1 753 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 CDK5RAP3Q96JB5 506 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 PNMA5Q96PV4 448 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 TINF2Q9BSI4 451 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 ARHGAP39Q9C0H5 1083 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 TNMDQ9H2S6 317 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 SERTAD1Q9UHV2 236 aa11.51□□□□□ -0.57
VIPAS39-201ENST00000327028 DDX39AO00148 427 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 SLFN14P0C7P3 912 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 UBA1P22314 1058 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 JAK3P52333 1124 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 EPHA7Q15375 998 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 ZSCAN23Q3MJ62 389 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 OLFML2BQ68BL8 750 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 ZNF746Q6NUN9 644 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 EEPD1Q7L9B9 569 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 CEP57L1Q8IYX8 460 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 GIMAP8Q8ND71 665 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 CNNM3Q8NE01 707 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 EIF2AK1Q9BQI3 630 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 POLR3CQ9BUI4 534 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 KATNBL1Q9H079 304 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 CUEDC2Q9H467 287 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 STK17AQ9UEE5 414 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 LETM1O95202 739 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 SNAI1O95863 264 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 RPA1P27694 616 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 SFNP31947 248 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 IRF5Q13568 498 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 CAMK4Q16566 473 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 KANK3Q6NY19 840 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 RBM43Q6ZSC3 357 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 MIER3Q7Z3K6 550 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 CCDC34Q96HJ3 373 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 NT5C3AQ9H0P0 336 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 MAGEF1Q9HAY2 307 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 JPH1Q9HDC5 661 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms