RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 TAP1Q03518 808 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 ZNF618Q5T7W0 954 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 USP17L6PQ6QN14 398 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 SGMS1Q86VZ5 419 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 FANCBQ8NB91 859 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 PIBF1Q8WXW3 757 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 ZFP91Q96JP5 570 aaPredicted RBP20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 CDHR1Q96JP9 859 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 MYL10Q9BUA6 226 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 PSTPIP2Q9H939 334 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 GTPBP6O43824 516 aaPredicted RBP20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 MRPS5P82675 430 aaKnown RBP20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 ZNF200P98182 395 aaPredicted RBP20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 CYFIP1Q7L576 1253 aa20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 ATP6V0A1Q93050 837 aa20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 ASB2Q96Q27 587 aa20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 GPR20Q99678 358 aa20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 ANO2Q9NQ90 1003 aa20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 RTEL1Q9NZ71 1219 aa20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 ZNF215Q9UL58 517 aaPredicted RBP20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 NCOR1O75376 2440 aa20.37■□□□□ 0.85
PTPMT1-201ENST00000326656 BDP1A6H8Y1 2624 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 RSPH10B2B2RC85 870 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 MAFGO15525 162 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 SORBS3O60504 671 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 LGR5O75473 907 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 PLEKHA8P1O95397 391 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 RSPH10BP0C881 870 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 SEMA3FQ13275 785 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 CCDC85BQ15834 202 aaPredicted RBP20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 SYNE3Q6ZMZ3 975 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 CENPQQ7L2Z9 268 aaPredicted RBP20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 GPRASP2Q96D09 838 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 RAD9AQ99638 391 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 ZBED2Q9BTP6 218 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 RNPEPQ9H4A4 650 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 PRDM6Q9NQX0 595 aa20.36■□□□□ 0.85
PTPMT1-201ENST00000326656 GJB5O95377 273 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 SMIM10L2AP0DMW4 78 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 SMIM10L2BP0DMW5 78 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 THPOP40225 353 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 HIC1Q14526 733 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 TSGA10IPQ3SY00 556 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 WNT8BQ93098 351 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 BCAS3Q9H6U6 928 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 MTCH2Q9Y6C9 303 aa20.35■□□□□ 0.85
PTPMT1-201ENST00000326656 MBTPS1Q14703 1052 aa20.34■□□□□ 0.85
PTPMT1-201ENST00000326656 AAK1Q2M2I8 961 aa20.34■□□□□ 0.85
PTPMT1-201ENST00000326656 TMTC3Q6ZXV5 915 aa20.34■□□□□ 0.85
PTPMT1-201ENST00000326656 LMCD1Q9NZU5 365 aa20.34■□□□□ 0.85
PTPMT1-201ENST00000326656 PRRC2BQ5JSZ5 2229 aaKnown RBP20.34■□□□□ 0.85
PTPMT1-201ENST00000326656 PTPRSQ13332 1948 aa20.33■□□□□ 0.85
PTPMT1-201ENST00000326656 SPDYE3A6NKU9 549 aa20.33■□□□□ 0.85
PTPMT1-201ENST00000326656 ARNTL2Q8WYA1 636 aa20.33■□□□□ 0.85
PTPMT1-201ENST00000326656 NEK1Q96PY6 1258 aa20.33■□□□□ 0.85
PTPMT1-201ENST00000326656 RBM28Q9NW13 759 aaKnown RBP20.33■□□□□ 0.85
PTPMT1-201ENST00000326656 KAT6AQ92794 2004 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 NRCAMQ92823 1304 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 TREHO43280 583 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 RXRAP19793 462 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 ADAM17P78536 824 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 DEFB103AP81534 67 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 PLEKHG4Q58EX7 1191 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 DHX32Q7L7V1 743 aaKnown RBP20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 CMTR1Q8N1G2 835 aaKnown RBP20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 EHMT1Q9H9B1 1298 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 CERS4Q9HA82 394 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 INSL6Q9Y581 213 aa20.32■□□□□ 0.84
PTPMT1-201ENST00000326656 DOCK5Q9H7D0 1870 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 AMHP03971 560 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 ITGB5P18084 799 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 EXOSC10Q01780 885 aaKnown RBP20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 MKRN4PQ13434 485 aaPredicted RBP20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 COL9A3Q14050 684 aaPredicted RBP20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 KRT32Q14532 448 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 APOA5Q6Q788 366 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 RPAINQ86UA6 219 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 IL27Q8NEV9 243 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 DBF4BQ8NFT6 615 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 SEPT1Q8WYJ6 367 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 SEPT8Q92599 483 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 SETD4Q9NVD3 440 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 COG5Q9UP83 839 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 UBIAD1Q9Y5Z9 338 aa20.31■□□□□ 0.84
PTPMT1-201ENST00000326656 REV3LO60673 3130 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 hCG_1984214I3L0E3 225 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 TNFRSF10AO00220 468 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 RFXAPO00287 272 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 ARHGEF15O94989 841 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 HMGB1P09429 215 aaKnown RBP20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 KCNA2P16389 499 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 RCAN1P53805 252 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 ERVK-21P61565 698 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 MTMR1Q13613 665 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 TCTN1Q2MV58 587 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 FAM26DQ5JW98 314 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 MICU3Q86XE3 530 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 CCDC82Q8N4S0 544 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 ZNF713Q8N859 430 aaPredicted RBP20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 LRRC2Q9BYS8 371 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms