RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TSG101Q99816 390 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 LSM14BQ9BX40 385 aaKnown RBP19.64■□□□□ 0.73
PRKCB-202ENST00000321728 ADAMTS1Q9UHI8 967 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 LEMD3Q9Y2U8 911 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 ATP6V0A2Q9Y487 856 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 COL1A1P02452 1464 aaPredicted RBP19.64■□□□□ 0.73
PRKCB-202ENST00000321728 TXKP42681 527 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 CUL1Q13616 776 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 CAVIN4Q5BKX8 364 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 LRRC55Q6ZSA7 311 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 SLC51AQ86UW1 340 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.64■□□□□ 0.73
PRKCB-202ENST00000321728 SGSM3Q96HU1 749 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 CDK5RAP3Q96JB5 506 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 NUCKS1Q9H1E3 243 aaKnown RBP19.64■□□□□ 0.73
PRKCB-202ENST00000321728 ZNF804BA4D1E1 1349 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 A0A087X0T9 212 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 H0YGN5 161 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 CEP104O60308 925 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 FAM228BP0C875 321 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 PPP2R2AP63151 447 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 BIRC3Q13489 604 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 E2F5Q15329 346 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 SLC18A3Q16572 532 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 CCDC50Q8IVM0 306 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 C3orf20Q8ND61 904 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 AP1M1Q9BXS5 423 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 MAD2L2Q9UI95 211 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 NOVA2Q9UNW9 492 aaKnown RBP19.63■□□□□ 0.73
PRKCB-202ENST00000321728 NFS1Q9Y697 457 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 CACNA1SQ13698 1873 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 CYTH3O43739 400 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 MYBP10242 640 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 EZRP15311 586 aaKnown RBP19.63■□□□□ 0.73
PRKCB-202ENST00000321728 ECHS1P30084 290 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 GNAQP50148 359 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 NAPAP54920 295 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 NONOQ15233 471 aaKnown RBP eCLIP19.63■□□□□ 0.731e-6■■□□□ 12.5
PRKCB-202ENST00000321728 CPLX4Q7Z7G2 160 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 FAM212AQ96EL1 285 aa19.63■□□□□ 0.73
PRKCB-202ENST00000321728 SCTRP47872 440 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 SLC35G1Q2M3R5 365 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 GLIS3Q8NEA6 775 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 RAPGEF5Q92565 580 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 GOLPH3Q9H4A6 298 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 IL17RBQ9NRM6 502 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 MCM9Q9NXL9 1143 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 TFCP2L1Q9NZI6 479 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 FBXL5Q9UKA1 691 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 TPX2Q9ULW0 747 aaKnown RBP19.62■□□□□ 0.73
PRKCB-202ENST00000321728 NOL4O94818 638 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 CRKLP46109 303 aaKnown RBP19.62■□□□□ 0.73
PRKCB-202ENST00000321728 KLHL30Q0D2K2 578 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 GRM4Q14833 912 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 GKAP1Q5VSY0 366 aaPredicted RBP19.62■□□□□ 0.73
PRKCB-202ENST00000321728 EP400NLQ6ZTU2 488 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 ANKS1AQ92625 1134 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 ARPP21Q9UBL0 812 aaPredicted RBP19.62■□□□□ 0.73
PRKCB-202ENST00000321728 CNOT8Q9UFF9 292 aaKnown RBP19.62■□□□□ 0.73
PRKCB-202ENST00000321728 CASZ1Q86V15 1759 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 BCL9O00512 1426 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 DCCP43146 1447 aa19.62■□□□□ 0.73
PRKCB-202ENST00000321728 PVALEFA0A1B0GWK0 134 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 PHF20L1A8MW92 1017 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 TRAF5O00463 557 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 GOLGA8HP0CJ92 632 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 IL6STP40189 918 aaPredicted RBP19.61■□□□□ 0.73
PRKCB-202ENST00000321728 MECOMQ03112 1051 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 KRT25Q7Z3Z0 450 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 NEK8Q86SG6 692 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 FAM228AQ86W67 206 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 FAM133AQ8N9E0 248 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
PRKCB-202ENST00000321728 SYN2Q92777 582 aaPredicted RBP19.61■□□□□ 0.73
PRKCB-202ENST00000321728 NEUROG2Q9H2A3 272 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 BLOC1S4Q9NUP1 217 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 TMEM59LQ9UK28 342 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 MAGOHP61326 146 aaKnown RBP19.61■□□□□ 0.73
PRKCB-202ENST00000321728 GRB10Q13322 594 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 MAGOHBQ96A72 148 aaKnown RBP19.61■□□□□ 0.73
PRKCB-202ENST00000321728 NSUN4Q96CB9 384 aaKnown RBP19.61■□□□□ 0.73
PRKCB-202ENST00000321728 CPVLQ9H3G5 476 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 KANSL2Q9H9L4 492 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 ATP8A2Q9NTI2 1148 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 COL4A3BPQ9Y5P4 624 aa19.61■□□□□ 0.73
PRKCB-202ENST00000321728 INTS5Q6P9B9 1019 aaKnown RBP19.6■□□□□ 0.73
PRKCB-202ENST00000321728 DGKHQ86XP1 1220 aa19.6■□□□□ 0.73
PRKCB-202ENST00000321728 DDX47Q9H0S4 455 aaKnown RBP19.6■□□□□ 0.73
PRKCB-202ENST00000321728 TMCO5BA8MYB1 307 aa19.6■□□□□ 0.73
PRKCB-202ENST00000321728 DCDC2CA8MYV0 355 aa19.6■□□□□ 0.73
PRKCB-202ENST00000321728 SART1O43290 800 aaKnown RBP19.6■□□□□ 0.73
PRKCB-202ENST00000321728 USP17L8P0C7I0 530 aa19.6■□□□□ 0.73
PRKCB-202ENST00000321728 FLT3P36888 993 aa19.6■□□□□ 0.73
PRKCB-202ENST00000321728 EIF1ADQ8N9N8 165 aaKnown RBP19.6■□□□□ 0.73
PRKCB-202ENST00000321728 MIEF2Q96C03 454 aa19.6■□□□□ 0.73
PRKCB-202ENST00000321728 A0A1B0GUL6 1792 aa19.6■□□□□ 0.73
PRKCB-202ENST00000321728 USP17L3A6NCW0 530 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 USP17L4A6NCW7 530 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 OPLAHO14841 1288 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 KRT71Q3SY84 523 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms