RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 ATP9AO75110 1047 aa23.88■■□□□ 1.41
YBX1-201ENST00000321358 NFASCO94856 1347 aa23.88■■□□□ 1.41
YBX1-201ENST00000321358 GGPS1O95749 300 aa23.88■■□□□ 1.41
YBX1-201ENST00000321358 GH1P01241 217 aa23.88■■□□□ 1.41
YBX1-201ENST00000321358 KCNA2P16389 499 aa23.88■■□□□ 1.41
YBX1-201ENST00000321358 UBA1P22314 1058 aaKnown RBP23.88■■□□□ 1.41
YBX1-201ENST00000321358 TRPV1Q8NER1 839 aa23.88■■□□□ 1.41
YBX1-201ENST00000321358 HAS1Q92839 578 aa23.88■■□□□ 1.41
YBX1-201ENST00000321358 TTC12Q9H892 705 aaPredicted RBP23.88■■□□□ 1.41
YBX1-201ENST00000321358 ARIH2O95376 493 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 LAMC2Q13753 1193 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 PTPAQ15257 358 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 CYFIP1Q7L576 1253 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 FERMT2Q96AC1 680 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 GBP4Q96PP9 640 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 JPH1Q9HDC5 661 aaPredicted RBP23.87■■□□□ 1.41
YBX1-201ENST00000321358 RCOR1Q9UKL0 485 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 MYH7BA7E2Y1 1941 aa23.87■■□□□ 1.41
YBX1-201ENST00000321358 MSCO60682 206 aa23.86■■□□□ 1.41
YBX1-201ENST00000321358 RARBP10826 455 aa23.86■■□□□ 1.41
YBX1-201ENST00000321358 SMPD1P17405 629 aa23.86■■□□□ 1.41
YBX1-201ENST00000321358 MARCKSP29966 332 aaPredicted RBP23.86■■□□□ 1.41
YBX1-201ENST00000321358 SP2Q02086 613 aa23.86■■□□□ 1.41
YBX1-201ENST00000321358 ITGB3BPQ13352 177 aaPredicted RBP23.86■■□□□ 1.41
YBX1-201ENST00000321358 CELF3Q5SZQ8 465 aaKnown RBP23.86■■□□□ 1.41
YBX1-201ENST00000321358 AP5M1Q9H0R1 490 aa23.86■■□□□ 1.41
YBX1-201ENST00000321358 SPC25Q9HBM1 224 aa23.86■■□□□ 1.41
YBX1-201ENST00000321358 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.85■■□□□ 1.41
YBX1-201ENST00000321358 DDX39AO00148 427 aaKnown RBP23.85■■□□□ 1.41
YBX1-201ENST00000321358 NOP56O00567 594 aaKnown RBP23.85■■□□□ 1.41
YBX1-201ENST00000321358 PPP6R2O75170 966 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 PSMD10O75832 226 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 CCND3P30281 292 aaPredicted RBP23.85■■□□□ 1.41
YBX1-201ENST00000321358 TECP42680 631 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 ME1P48163 572 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 KRT76Q01546 638 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 METTL7BQ6UX53 244 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 KRI1Q8N9T8 703 aaKnown RBP23.85■■□□□ 1.41
YBX1-201ENST00000321358 GJA10Q969M2 543 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 ABHD8Q96I13 439 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 SLC9A2Q9UBY0 812 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 Q9Y3F1 56 aa23.85■■□□□ 1.41
YBX1-201ENST00000321358 MORC2Q9Y6X9 1032 aaPredicted RBP23.85■■□□□ 1.41
YBX1-201ENST00000321358 VWA3AA6NCI4 1184 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 DUSP11O75319 330 aaKnown RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 BRDTQ58F21 947 aaPredicted RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 OR6J1Q8NGC5 347 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 LEO1Q8WVC0 666 aaPredicted RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 CHAMP1Q96JM3 812 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 MCOLN1Q9GZU1 580 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 DHX15O43143 795 aaKnown RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 DYNC1LI2O43237 492 aaPredicted RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 SORBS3O60504 671 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 PDIA5Q14554 519 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 ZNF746Q6NUN9 644 aaPredicted RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 COPS5Q92905 334 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 SPATA33Q96N06 139 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 DDX20Q9UHI6 824 aaKnown RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 SAMM50Q9Y512 469 aa23.84■■□□□ 1.41
YBX1-201ENST00000321358 SRPRBQ9Y5M8 271 aaKnown RBP23.84■■□□□ 1.41
YBX1-201ENST00000321358 CHMP2AO43633 222 aa23.83■■□□□ 1.41
YBX1-201ENST00000321358 FARP2O94887 1054 aaPredicted RBP23.83■■□□□ 1.41
YBX1-201ENST00000321358 FXR2P51116 673 aaKnown RBP eCLIP23.83■■□□□ 1.41
YBX1-201ENST00000321358 SP4Q02446 784 aa23.83■■□□□ 1.41
YBX1-201ENST00000321358 TLK2Q86UE8 772 aa23.83■■□□□ 1.41
YBX1-201ENST00000321358 EMID1Q96A84 441 aaPredicted RBP23.83■■□□□ 1.41
YBX1-201ENST00000321358 GNEQ9Y223 722 aaKnown RBP23.83■■□□□ 1.41
YBX1-201ENST00000321358 GOLGA6L4A6NEF3 574 aa23.82■■□□□ 1.4
YBX1-201ENST00000321358 SFNP31947 248 aa23.82■■□□□ 1.4
YBX1-201ENST00000321358 LONP1P36776 959 aaKnown RBP23.82■■□□□ 1.4
YBX1-201ENST00000321358 PPP2R5CQ13362 524 aa23.82■■□□□ 1.4
YBX1-201ENST00000321358 GJC2Q5T442 439 aaPredicted RBP23.82■■□□□ 1.4
YBX1-201ENST00000321358 SMAP1Q8IYB5 467 aaPredicted RBP23.82■■□□□ 1.4
YBX1-201ENST00000321358 ERMNQ8TAM6 284 aa23.82■■□□□ 1.4
YBX1-201ENST00000321358 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.82■■□□□ 1.42e-11■■■■■ 64.9
YBX1-201ENST00000321358 GDPD2Q9HCC8 539 aa23.82■■□□□ 1.4
YBX1-201ENST00000321358 LRWD1Q9UFC0 647 aa23.82■■□□□ 1.4
YBX1-201ENST00000321358 STK24Q9Y6E0 443 aa23.82■■□□□ 1.4
YBX1-201ENST00000321358 WDR64B1ANS9 1081 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 MYCP01106 439 aaPredicted RBP23.81■■□□□ 1.4
YBX1-201ENST00000321358 JAK3P52333 1124 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 ARHGAP1Q07960 439 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 TMEM63BQ5T3F8 832 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 NCAPH2Q6IBW4 605 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 MIER3Q7Z3K6 550 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 SEPT1Q8WYJ6 367 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 AK8Q96MA6 479 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 RNF208Q9H0X6 261 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 VAV3Q9UKW4 847 aa23.81■■□□□ 1.4
YBX1-201ENST00000321358 GOLGA6L22H0YM25 854 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 CUTAO60888 179 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 CPT1AP50416 773 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 CLEC17AQ6ZS10 378 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 RDM1Q8NG50 284 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 PPTC7Q8NI37 304 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 ARMC5Q96C12 935 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 UNC93B1Q9H1C4 597 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 UNC45AQ9H3U1 944 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 BCAS3Q9H6U6 928 aa23.8■■□□□ 1.4
YBX1-201ENST00000321358 XPNPEP3Q9NQH7 507 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms