RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 H3BRB1 525 aa33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 DEXIO95424 95 aa33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 CYP2C9P11712 490 aa33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 SREBF1P36956 1147 aa33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 CLK2P49760 499 aaKnown RBP33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 C9orf50Q5SZB4 431 aa33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 JAKMIP3Q5VZ66 844 aa33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 TUT1Q9H6E5 874 aaKnown RBP33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 ZNF215Q9UL58 517 aaPredicted RBP33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 LAMA3Q16787 3333 aa33.29■■■□□ 2.92
SYNGR1-202ENST00000318801 PPFIA3O75145 1194 aa33.28■■■□□ 2.92
SYNGR1-202ENST00000318801 CEP55Q53EZ4 464 aa33.28■■■□□ 2.92
SYNGR1-202ENST00000318801 PSRC1Q6PGN9 363 aaPredicted RBP33.28■■■□□ 2.92
SYNGR1-202ENST00000318801 TMEM260Q9NX78 707 aa33.28■■■□□ 2.92
SYNGR1-202ENST00000318801 GTF2IRD1Q9UHL9 959 aa33.28■■■□□ 2.92
SYNGR1-202ENST00000318801 HAS3O00219 553 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 CCL23P55773 120 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 NLRP5P59047 1200 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 SP4Q02446 784 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 IL17RAQ96F46 866 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 PGBD1Q96JS3 809 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 GPR20Q99678 358 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 IL23AQ9NPF7 189 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 HDAC6Q9UBN7 1215 aa33.27■■■□□ 2.92
SYNGR1-202ENST00000318801 PITPNM1O00562 1244 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 SOX1O00570 391 aaPredicted RBP33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 LGALS2P05162 132 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 NEK4P51957 841 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 ARHGAP4P98171 946 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 FAM177A1Q8N128 213 aaPredicted RBP33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 PPP1R13LQ8WUF5 828 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 LRCH3Q96II8 777 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 SDF4Q9BRK5 362 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 C16orf70Q9BSU1 422 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 MTIF3Q9H2K0 278 aaKnown RBP33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 BCAS3Q9H6U6 928 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 KCNH7Q9NS40 1196 aa33.26■■■□□ 2.92
SYNGR1-202ENST00000318801 KCNA2P16389 499 aa33.25■■■□□ 2.91
SYNGR1-202ENST00000318801 EPHB4P54760 987 aa33.25■■■□□ 2.91
SYNGR1-202ENST00000318801 VPS54Q9P1Q0 977 aa33.25■■■□□ 2.91
SYNGR1-202ENST00000318801 ATP9AO75110 1047 aa33.24■■■□□ 2.91
SYNGR1-202ENST00000318801 SEC24BO95487 1268 aa33.24■■■□□ 2.91
SYNGR1-202ENST00000318801 AK2P54819 239 aa33.24■■■□□ 2.91
SYNGR1-202ENST00000318801 GDF6Q6KF10 455 aaPredicted RBP33.24■■■□□ 2.91
SYNGR1-202ENST00000318801 CAGE1Q8TC20 777 aa33.24■■■□□ 2.91
SYNGR1-202ENST00000318801 SEPT1Q8WYJ6 367 aa33.24■■■□□ 2.91
SYNGR1-202ENST00000318801 PKD2L1Q9P0L9 805 aa33.24■■■□□ 2.91
SYNGR1-202ENST00000318801 PFKFB2O60825 505 aa33.23■■■□□ 2.91
SYNGR1-202ENST00000318801 XBP1P17861 261 aa33.23■■■□□ 2.91
SYNGR1-202ENST00000318801 NIPA1Q7RTP0 329 aa33.23■■■□□ 2.91
SYNGR1-202ENST00000318801 TPCN1Q9ULQ1 816 aa33.23■■■□□ 2.91
SYNGR1-202ENST00000318801 DOCK5Q9H7D0 1870 aa33.23■■■□□ 2.91
SYNGR1-202ENST00000318801 MEIS1O00470 390 aa33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 FGBP02675 491 aa33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 PFKMP08237 780 aa33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 GNAT1P11488 350 aa33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 RFC2P35250 354 aa33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 UTP14CQ5TAP6 766 aaKnown RBP33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 BUD13Q9BRD0 619 aaKnown RBP eCLIP33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 C22orf23Q9BZE7 217 aa33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 JPH1Q9HDC5 661 aaPredicted RBP33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 UMODL1Q5DID0 1318 aa33.22■■■□□ 2.91
SYNGR1-202ENST00000318801 CYP3A4P08684 503 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 TCF7P36402 384 aaPredicted RBP33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 SCRN1Q12765 414 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 GALNT17Q6IS24 598 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 WNT8AQ9H1J5 351 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 LAMA2P24043 3122 aaKnown RBP33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 ACRP10323 421 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 TMEM240Q5SV17 173 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 ZNF365Q70YC5 407 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 CYP2W1Q8TAV3 490 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 SLC9A2Q9UBY0 812 aa33.21■■■□□ 2.91
SYNGR1-202ENST00000318801 C17orf102A2RUQ5 167 aa33.2■■■□□ 2.9
SYNGR1-202ENST00000318801 PTK7Q13308 1070 aa33.2■■■□□ 2.9
SYNGR1-202ENST00000318801 AFAP1L1Q8TED9 768 aa33.2■■■□□ 2.9
SYNGR1-202ENST00000318801 WASF1Q92558 559 aa33.2■■■□□ 2.9
SYNGR1-202ENST00000318801 GLG1Q92896 1179 aa33.2■■■□□ 2.9
SYNGR1-202ENST00000318801 NFASCO94856 1347 aa33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 PARNO95453 639 aaKnown RBP33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 SMAD3P84022 425 aaKnown RBP33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 C16orf59Q7L2K0 433 aa33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 PLA2G4DQ86XP0 818 aa33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 TNPO1Q92973 898 aaKnown RBP33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 SCLYQ96I15 445 aa33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 SMARCAD1Q9H4L7 1026 aa33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 AZI2Q9H6S1 392 aa33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 PCDHA4Q9UN74 947 aa33.19■■■□□ 2.9
SYNGR1-202ENST00000318801 SZT2Q5T011 3432 aa33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 KAT6AQ92794 2004 aa33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 HSFX4A0A1B0GTS1 333 aaPredicted RBP33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 HSFX3A0A1B0GWH4 333 aaPredicted RBP33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 IQCF3P0C7M6 154 aa33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 ARP10275 920 aa33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 SETQ01105 290 aaPredicted RBP33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 ATP6V0A1Q93050 837 aa33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 AGO4Q9HCK5 861 aaKnown RBP33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 ERAP1Q9NZ08 941 aa33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 TRIP12Q14669 1992 aaPredicted RBP33.18■■■□□ 2.9
SYNGR1-202ENST00000318801 SMIM10L2AP0DMW4 78 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms