RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 UNC45AQ9H3U1 944 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 LRWD1Q9UFC0 647 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 SRRDQ9UH36 339 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 TCEAL9Q9UHQ7 104 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 EML1O00423 815 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 KCNA2P16389 499 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 CNGA1P29973 690 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 ORC2Q13416 577 aaPredicted RBP17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 ACVR2BQ13705 512 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 KARSQ15046 597 aaKnown RBP17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 SLC5A5Q92911 643 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 TEKT3Q9BXF9 490 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 MAF1Q9H063 256 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 VAV3Q9UKW4 847 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 DIS3Q9Y2L1 958 aaKnown RBP17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 SPATA31C2B4DYI2 1134 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 FOXN1O15353 648 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 ADCY6O43306 1168 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 NR1I2O75469 434 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 PSMD10O75832 226 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 HOXC6P09630 235 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 PFKFB1P16118 471 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 PRPHP41219 470 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 CCDC144BQ3MJ40 725 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 MAMDC4Q6UXC1 1216 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 ZNF467Q7Z7K2 595 aaPredicted RBP17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 MRPS27Q92552 414 aaKnown RBP17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 FAM20AQ96MK3 541 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
PDLIM5-202ENST00000318007 DHX15O43143 795 aaKnown RBP17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 STAM2O75886 525 aa17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 GGPS1O95749 300 aa17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 SPIRE1Q08AE8 756 aa17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 TAPT1Q6NXT6 567 aa17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 OTOP1Q7RTM1 612 aa17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 SNX29Q8TEQ0 813 aa17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 KATNBL1Q9H079 304 aa17.34■□□□□ 0.37
PDLIM5-202ENST00000318007 A0A087X0B3 334 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 TBX3O15119 743 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 CCNE2O96020 404 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 HSPA1AP0DMV8 641 aaKnown RBP17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 HSPA1BP0DMV9 641 aaKnown RBP17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 UBA7P41226 1012 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 FXR2P51116 673 aaKnown RBP eCLIP17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 NIPA1Q7RTP0 329 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 IGSF22Q8N9C0 903 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 BANK1Q8NDB2 785 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 MORC4Q8TE76 937 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 ABHD16BQ9H3Z7 469 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 MLXIPQ9HAP2 919 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 RGL1Q9NZL6 768 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 SYNGAP1Q96PV0 1343 aa17.33■□□□□ 0.37
PDLIM5-202ENST00000318007 ADCY3O60266 1144 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 HOXD10P28358 340 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 LONP1P36776 959 aaKnown RBP17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 LBX1P52954 281 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 TTLL4Q14679 1199 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 RESP18Q5W5W9 173 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 SCFD2Q8WU76 684 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 CDHR1Q96JP9 859 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.36
PDLIM5-202ENST00000318007 POLR2DO15514 142 aaKnown RBP17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 CTTNQ14247 550 aaKnown RBP17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 CAMK4Q16566 473 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 CABP7Q86V35 215 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 SH3TC2Q8TF17 1288 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 DHX58Q96C10 678 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
PDLIM5-202ENST00000318007 POTEB3A0JP26 581 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 SMPD1P17405 629 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 CCT6AP40227 531 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 DHX8Q14562 1220 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 ECM1Q16610 540 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 HSDL1Q3SXM5 330 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 OLFML2BQ68BL8 750 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 POTEBQ6S5H4 581 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 MIER3Q7Z3K6 550 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 MMTAG2Q9BU76 263 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 TBC1D22BQ9NU19 505 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 SLC9A2Q9UBY0 812 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 KCNH3Q9ULD8 1083 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 POTEFA5A3E0 1075 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 MAFGO15525 162 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 MED24O75448 989 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 FARP2O94887 1054 aaPredicted RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 XRCC5P13010 732 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 PRKAR2AP13861 404 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 CMA1P23946 247 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 CACNB2Q08289 660 aaPredicted RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 MFSD14CQ5VZR4 134 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 KRT79Q5XKE5 535 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms