RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 YWHAEP62258 255 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 PREPLQ4J6C6 727 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ABCF3Q9NUQ8 709 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 MCM9Q9NXL9 1143 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 LRP2BPQ9P2M1 347 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 HPCAL4Q9UM19 191 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 HNRNPRO43390 633 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CYTH3O43739 400 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 E2F6O75461 281 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 XRCC5P13010 732 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 LSP1P33241 339 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 MDH1P40925 334 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 COPB1P53618 953 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 XIAPP98170 497 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PDE1BQ01064 536 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 HIC2Q96JB3 615 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CCT8L2Q96SF2 557 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ZKSCAN3Q9BRR0 538 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 FUT8Q9BYC5 575 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PAPOLBQ9NRJ5 636 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 A0A1B0GTH6 734 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC22O60826 627 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 KCNA4P22459 653 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 GGCXP38435 758 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 KLHL30Q0D2K2 578 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 RASGRF1Q13972 1273 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 IQCB1Q15051 598 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 NONOQ15233 471 aaKnown RBP eCLIP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ITFG2Q969R8 447 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 DHX58Q96C10 678 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 OPTNQ96CV9 577 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 KCNF1Q9H3M0 494 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ABHD10Q9NUJ1 306 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ZFATQ9P243 1243 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PA2G4Q9UQ80 394 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 AP4S1Q9Y587 144 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 MROH1Q8NDA8 1641 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ECM29Q5VYK3 1845 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 NACAE9PAV3 2078 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 BIRC5O15392 142 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SNRPA1P09661 255 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SCP2P22307 547 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CHRNA3P32297 505 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 RAPGEF1Q13905 1077 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 GSTA5Q7RTV2 222 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 OSBPL1AQ9BXW6 950 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 FRMD8Q9BZ67 464 aaPredicted RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ZMYND12Q9H0C1 365 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CHPF2Q9P2E5 772 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 INTUQ9ULD6 942 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 WFS1O76024 890 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 TBC1D8O95759 1140 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PAPOLAP51003 745 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SKOR1P84550 965 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SPARCL1Q14515 664 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 MAN2A1Q16706 1144 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 GSTA3Q16772 222 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF658Q5TYW1 1059 aaPredicted RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SNX29Q8TEQ0 813 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 HPS3Q969F9 1004 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 NCOA5Q9HCD5 579 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 RIF1Q5UIP0 2472 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SSU72P8A0A1W2PR75 194 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CBFA2T3O75081 653 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CCZ1BP86790 482 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CCZ1P86791 482 aaPredicted RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 GUCY2DQ02846 1103 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SLC44A4Q53GD3 710 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PCNX4Q63HM2 1172 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PCGF5Q86SE9 256 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 OSCARQ8IYS5 282 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 TRPC4APQ8TEL6 797 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PIK3R5Q8WYR1 880 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 MTRQ99707 1265 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 DCLRE1BQ9H816 532 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 C8orf4Q9NR00 106 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 TMCO1Q9UM00 188 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 TRIM33Q9UPN9 1127 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PKDREJQ9NTG1 2253 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PRR14LQ5THK1 2151 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 A8MXQ7 604 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 FOXO3O43524 673 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 SSBP05455 408 aaKnown RBP eCLIP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PSMC4P43686 418 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 DNA2P51530 1060 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 IRAK1P51617 712 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 PPARDQ03181 441 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 MYO1EQ12965 1108 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 AKAP4Q5JQC9 854 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 METTL24Q5JXM2 366 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 FBXL16Q8N461 479 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 NDUFB9Q9Y6M9 179 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ADGRA3Q8IWK6 1321 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CEP170BQ9Y4F5 1589 aaPredicted RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 MAGEA13PA6NCF6 341 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 XPO1O14980 1071 aaKnown RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 CIAO1O76071 339 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 STAT1P42224 750 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 BEND6Q5SZJ8 279 aaPredicted RBP4.88□□□□□ -1.63
CNOT1-201ENST00000317147 LRRC8BQ6P9F7 803 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms