RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 BMS1Q14692 1282 aaKnown RBP16.38■□□□□ 0.21
CLK4-201ENST00000316308 FKBP15Q5T1M5 1219 aa16.38■□□□□ 0.21
CLK4-201ENST00000316308 FAM114A1Q8IWE2 563 aa16.38■□□□□ 0.21
CLK4-201ENST00000316308 DRC1Q96MC2 740 aa16.38■□□□□ 0.21
CLK4-201ENST00000316308 PRR12Q9ULL5 1215 aa16.38■□□□□ 0.21
CLK4-201ENST00000316308 CAPN6Q9Y6Q1 641 aa16.38■□□□□ 0.21
CLK4-201ENST00000316308 BMP3P12645 472 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 HOXD13P35453 343 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
CLK4-201ENST00000316308 GYS2P54840 703 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 TSR1Q2NL82 804 aaKnown RBP16.37■□□□□ 0.21
CLK4-201ENST00000316308 STYK1Q6J9G0 422 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 BAP1Q92560 729 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 PDE2AO00408 941 aaPredicted RBP16.37■□□□□ 0.21
CLK4-201ENST00000316308 POLR3GO15318 223 aaPredicted RBP16.37■□□□□ 0.21
CLK4-201ENST00000316308 NOL4O94818 638 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 VSNL1P62760 191 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 MRPS25P82663 173 aaKnown RBP16.37■□□□□ 0.21
CLK4-201ENST00000316308 DGKZQ13574 1117 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 ENOX2Q16206 610 aaKnown RBP16.37■□□□□ 0.21
CLK4-201ENST00000316308 HYIQ5T013 277 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 FAM83BQ5T0W9 1011 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 FUT8Q9BYC5 575 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 ZNF277Q9NRM2 450 aaPredicted RBP16.37■□□□□ 0.21
CLK4-201ENST00000316308 FBXO28Q9NVF7 368 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 C10orf71Q711Q0 1435 aa16.37■□□□□ 0.21
CLK4-201ENST00000316308 CYP3A7-CYP3A51PA0A087WV96 503 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
CLK4-201ENST00000316308 CYP3A7P24462 503 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 USP11P51784 963 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 GFPT1Q06210 699 aaPredicted RBP16.36■□□□□ 0.21
CLK4-201ENST00000316308 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
CLK4-201ENST00000316308 TRAPPC11Q7Z392 1133 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 PIGOQ8TEQ8 1089 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 PSMB7Q99436 277 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 TMEM39BQ9GZU3 492 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 KCTD10Q9H3F6 313 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLK4-201ENST00000316308 SMARCAL1Q9NZC9 954 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 PLAGL2Q9UPG8 496 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 FAM170AA1A519 330 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 PSMD14O00487 310 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 TLR2O60603 784 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 ZMYND10O75800 440 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 LRRC63Q05C16 580 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 MRIQ9BWK5 157 aa16.36■□□□□ 0.21
CLK4-201ENST00000316308 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
CLK4-201ENST00000316308 CHMP2AO43633 222 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 CFBP00751 764 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 SEMA3FQ13275 785 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 LONRF2Q1L5Z9 754 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 GMCL1P1Q8NEA9 526 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 CCDC42Q96M95 316 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 REEP2Q9BRK0 252 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 WDR18Q9BV38 432 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 NUP58Q9BVL2 599 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 EHD2Q9NZN4 543 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 EIF3CLB5ME19 914 aaKnown RBP16.35■□□□□ 0.21
CLK4-201ENST00000316308 PRPF6O94906 941 aaKnown RBP16.35■□□□□ 0.21
CLK4-201ENST00000316308 MYBP10242 640 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 KIF11P52732 1056 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 HDLBPQ00341 1268 aaKnown RBP16.35■□□□□ 0.21
CLK4-201ENST00000316308 ARID5AQ03989 594 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 GIT2Q14161 759 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 CTTNQ14247 550 aaKnown RBP16.35■□□□□ 0.21
CLK4-201ENST00000316308 TERF2Q15554 542 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 CCDC40Q4G0X9 1142 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 SFR1Q86XK3 245 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 KSR1Q8IVT5 923 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 EIF3CQ99613 913 aaKnown RBP16.35■□□□□ 0.21
CLK4-201ENST00000316308 RUSC1Q9BVN2 902 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 VEZTQ9HBM0 779 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 COL4A3BPQ9Y5P4 624 aa16.35■□□□□ 0.21
CLK4-201ENST00000316308 SPDYE3A6NKU9 549 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 MOCS3O95396 460 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
CLK4-201ENST00000316308 ACTN1P12814 892 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 SLC15A2Q16348 729 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 FLAD1Q8NFF5 587 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 BHMT2Q9H2M3 363 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 ZNHIT6Q9NWK9 470 aaKnown RBP16.34■□□□□ 0.21
CLK4-201ENST00000316308 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 SREBF1P36956 1147 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
CLK4-201ENST00000316308 HGSNATQ68CP4 663 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 CEP112Q8N8E3 955 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 RETREG2Q8NC44 543 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 NT5C3AQ9H0P0 336 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 VAV3Q9UKW4 847 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
CLK4-201ENST00000316308 A0A1W2PQJ5 194 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms