RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 MTMR1Q13613 665 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 STYK1Q6J9G0 422 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 USP17L6PQ6QN14 398 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 HHIPL2Q6UWX4 724 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 VSTM4Q8IW00 320 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 MED10Q9BTT4 135 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 INO80BQ9C086 356 aaPredicted RBP14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 BHMT2Q9H2M3 363 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ZEB2O60315 1214 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 FDX1P10109 184 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 QRICH1Q2TAL8 776 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PDXDC2PQ6P474 469 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CPLX4Q7Z7G2 160 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RNF169Q8NCN4 708 aa14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RAVER2Q9HCJ3 691 aaKnown RBP14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ABT1Q9ULW3 272 aaKnown RBP14.01□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CCDC125Q86Z20 511 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PROCA1Q8NCQ7 364 aaPredicted RBP14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TLR3O15455 904 aaKnown RBP14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RUFY4Q6ZNE9 571 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RMDN3Q96TC7 470 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 NACA2Q9H009 215 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TBC1D22BQ9NU19 505 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 STIM2Q9P246 746 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RSPH14Q9UHP6 348 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 KDM6AO15550 1401 aaPredicted RBP14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ARHGAP4P98171 946 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CUL4BQ13620 913 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GIMAP8Q8ND71 665 aaPredicted RBP14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PPP1R13BQ96KQ4 1090 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SPZ1Q9BXG8 430 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 UAP1Q16222 522 aaPredicted RBP14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TCP11X2Q5H9J9 407 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CCDC89Q8N998 374 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 AFAP1L1Q8TED9 768 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GOLPH3LQ9H4A5 285 aa14□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ALDH3A1P30838 453 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 STXBP2Q15833 593 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SNRNP48Q6IEG0 339 aaKnown RBP13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 EEPD1Q7L9B9 569 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 FMR1NBQ8N0W7 255 aaPredicted RBP13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 IGDCC4Q8TDY8 1250 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GRK7Q8WTQ7 553 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RAD54LQ92698 747 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PCIF1Q9H4Z3 704 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 POTEMA6NI47 508 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RASA3Q14644 834 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 EP400NLQ6ZTU2 488 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PRPF38AQ8NAV1 312 aaKnown RBP13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GABPB2Q8TAK5 448 aaPredicted RBP13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TMEM260Q9NX78 707 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SAMD15Q9P1V8 674 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PYCARDQ9ULZ3 195 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 KRIT1O00522 736 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ATP2C2O75185 946 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PPP1R21Q6ZMI0 780 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 NEK9Q8TD19 979 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TRIM11Q96F44 468 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RNF181Q9P0P0 153 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GOLGA6BA6NDN3 693 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ARL1P40616 181 aaPredicted RBP13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PCDHB4Q9Y5E5 795 aa13.99□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ENTPD3O75355 529 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ZBED6P86452 979 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RASSF7Q02833 373 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 BRD3Q15059 726 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PPP1R2P3Q6NXS1 205 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 C2orf69Q8N8R5 385 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 NSUN6Q8TEA1 469 aaKnown RBP13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CACTINQ8WUQ7 758 aaKnown RBP13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 HAUS2Q9NVX0 235 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GCNT4Q9P109 453 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ZBTB16Q05516 673 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 NSMCE1Q8WV22 266 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RPS6KC1Q96S38 1066 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 MTMR4Q9NYA4 1195 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PXDNQ92626 1479 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 EFCAB8A8MWE9 144 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 EBAG9O00559 213 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 KRT81Q14533 505 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 STAG2Q8N3U4 1231 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 FAM193BQ96PV7 902 aaPredicted RBP13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 BPIFA3Q9BQP9 254 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 NDST4Q9H3R1 872 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 A0A0G2JLW4 131 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PVALEFA0A1B0GWK0 134 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 A6NNZ2 444 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TUBB8Q3ZCM7 444 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RNF146Q9NTX7 359 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 WDR64B1ANS9 1081 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 KIF28PB7ZC32 967 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 USP11P51784 963 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 KRT76Q01546 638 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms