RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 SHOX2O60902 331 aaPredicted RBP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 PPP1R11O60927 126 aaPredicted RBP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 HEXIM1O94992 359 aaKnown RBP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 FAM153BP0C7A2 387 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 SMARCA1P28370 1054 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 EPS15P42566 896 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 GUCY2FP51841 1108 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 CORO7P57737 925 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 PSMD2Q13200 908 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 KCTD19Q17RG1 926 aaPredicted RBP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 KIAA0753Q2KHM9 967 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 FAM153CQ494X1 144 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 ZCWPW2Q504Y3 356 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 HERC4Q5GLZ8 1057 aaPredicted RBP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 ADGRF4Q8IZF3 695 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 ZIM3Q96PE6 472 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
TNIP1-201ENST00000315050 FAM153AQ9UHL3 310 aa13.98□□□□□ -0.17
TNIP1-201ENST00000315050 A0A087X0T9 212 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 GOLGA8KD6RF30 607 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 OPA1O60313 960 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 SERPING1P05155 500 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 FAM228BP0C875 321 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 SLURP2P0DP57 97 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 PLCG2P16885 1265 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 ATP1A2P50993 1020 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 TTMPQ5BVD1 217 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 DNAAF5Q86Y56 855 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 KRT12Q99456 494 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 LRRC27Q9C0I9 530 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 DDX60LQ5H9U9 1706 aaKnown RBP13.97□□□□□ -0.17
TNIP1-201ENST00000315050 POTEB3A0JP26 581 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 POTECB2RU33 542 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 KLHL30Q0D2K2 578 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 RC3H1Q5TC82 1133 aaKnown RBP13.97□□□□□ -0.17
TNIP1-201ENST00000315050 POTEBQ6S5H4 581 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 KCTD1Q719H9 257 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 PROM2Q8N271 834 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 RNF10Q8N5U6 811 aaKnown RBP13.97□□□□□ -0.17
TNIP1-201ENST00000315050 CCDC43Q96MW1 224 aaKnown RBP13.97□□□□□ -0.17
TNIP1-201ENST00000315050 ATP6V0A2Q9Y487 856 aa13.97□□□□□ -0.17
TNIP1-201ENST00000315050 TRADDQ15628 312 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 PACS2Q86VP3 889 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 SH3GL2Q99962 352 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 GOLPH3Q9H4A6 298 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 GGA1Q9UJY5 639 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L15C9J2P7 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L13C9JLJ4 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L11C9JVI0 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L18D6R9N7 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L22D6RA61 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L17D6RBQ6 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L19D6RCP7 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L20D6RJB6 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.17
TNIP1-201ENST00000315050 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L24Q0WX57 530 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 PDCLQ13371 301 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 USP17L6PQ6QN14 398 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 GPBP1Q86WP2 473 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 IFT20Q8IY31 132 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
TNIP1-201ENST00000315050 CUL5Q93034 780 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 SAMM50Q9Y512 469 aa13.96□□□□□ -0.17
TNIP1-201ENST00000315050 TNRC6CQ9HCJ0 1690 aaKnown RBP13.95□□□□□ -0.18
TNIP1-201ENST00000315050 PNMA6FA0A0J9YX94 578 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 USP17L10C9JJH3 530 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 PPARDQ03181 441 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 ADAM9Q13443 819 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 SLC18A3Q16572 532 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 PPP4R3AQ6IN85 833 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 CERS3Q8IU89 383 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 EDEM3Q9BZQ6 932 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 LUC7LQ9NQ29 371 aaKnown RBP13.95□□□□□ -0.18
TNIP1-201ENST00000315050 C6orf229H3BNL8 230 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 EBAG9O00559 213 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
TNIP1-201ENST00000315050 PLA2G4BP0C869 781 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 ACTN1P12814 892 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 STAT3P40763 770 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 GTF2IP78347 998 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 NAB2Q15742 525 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
TNIP1-201ENST00000315050 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 CCDC65Q8IXS2 484 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 RUBCNQ92622 972 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 PSTPIP2Q9H939 334 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 TSKSQ9UJT2 592 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 DAGLAQ9Y4D2 1042 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 GRIN2DO15399 1336 aa13.95□□□□□ -0.18
TNIP1-201ENST00000315050 RBAK-RBAKDNI3L0D1 243 aa13.94□□□□□ -0.18
TNIP1-201ENST00000315050 RGL2O15211 777 aa13.94□□□□□ -0.18
TNIP1-201ENST00000315050 ZEB2O60315 1214 aa13.94□□□□□ -0.18
TNIP1-201ENST00000315050 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms