RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 ANO3Q9BYT9 981 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 ZMYND12Q9H0C1 365 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 JADE2Q9NQC1 790 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 MTMR10Q9NXD2 777 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 EYSQ5T1H1 3165 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 SMCO2A6NFE2 343 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 SREBF1P36956 1147 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 ADCY7P51828 1080 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 FGD1P98174 961 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 ZNF200P98182 395 aaPredicted RBP16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 NEDD9Q14511 834 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 HERVK_113Q902F9 699 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 GUCD1Q96NT3 240 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 TTYH1Q9H313 450 aaPredicted RBP16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
PPP1CA-201ENST00000312989 SPDYE3A6NKU9 549 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 IQCF3P0C7M6 154 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 PTGISQ16647 500 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 PSRC1Q6PGN9 363 aaPredicted RBP16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 NLRX1Q86UT6 975 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 DEFB123Q8N688 67 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 ALG1Q9BT22 464 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 KATNAL1Q9BW62 490 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
PPP1CA-201ENST00000312989 GSTTP1A0A1W2PQM5 241 aa16.72■□□□□ 0.27
PPP1CA-201ENST00000312989 ADAM17P78536 824 aa16.72■□□□□ 0.27
PPP1CA-201ENST00000312989 AP3B2Q13367 1082 aa16.72■□□□□ 0.27
PPP1CA-201ENST00000312989 NPY5RQ15761 445 aa16.72■□□□□ 0.27
PPP1CA-201ENST00000312989 ZNF274Q96GC6 653 aaPredicted RBP16.72■□□□□ 0.27
PPP1CA-201ENST00000312989 MXRA8Q9BRK3 442 aa16.72■□□□□ 0.27
PPP1CA-201ENST00000312989 CHD7Q9P2D1 2997 aa16.72■□□□□ 0.27
PPP1CA-201ENST00000312989 IGLV3-22A0A075B6J6 115 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 H3BRB1 525 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 FOSP01100 380 aaPredicted RBP16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 ARP10275 920 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 CHMP4BP1P59074 171 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 ANAPC15P60006 121 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 ITGB3BPQ13352 177 aaPredicted RBP16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 MTMR1Q13613 665 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 MBTPS1Q14703 1052 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 TCTN1Q2MV58 587 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 PCYT2Q99447 389 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 TANC1Q9C0D5 1861 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 TUT1Q9H6E5 874 aaKnown RBP16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 KCNH7Q9NS40 1196 aa16.71■□□□□ 0.27
PPP1CA-201ENST00000312989 GRXCR1A8MXD5 290 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 FAM86B1E9PN63 330 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 MEIS1O00470 390 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 FAM86B2P0C5J1 330 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 ARHGAP4P98171 946 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 CEP55Q53EZ4 464 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 SERINC5Q86VE9 423 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 C7orf31Q8N865 590 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 CAGE1Q8TC20 777 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 CDHR1Q96JP9 859 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 PDRG1Q9NUG6 133 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 TPCN1Q9ULQ1 816 aa16.7■□□□□ 0.26
PPP1CA-201ENST00000312989 MAFGO15525 162 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 FGBP02675 491 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 CYP3A4P08684 503 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 SMIM10L2AP0DMW4 78 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 SMIM10L2BP0DMW5 78 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 PBX2P40425 430 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 SCRN1Q12765 414 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 PTK7Q13308 1070 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 JAKMIP3Q5VZ66 844 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 OTOP2Q7RTS6 562 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 RASGRP4Q8TDF6 673 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 AFAP1L1Q8TED9 768 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 RNPEPQ9H4A4 650 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 AGO4Q9HCK5 861 aaKnown RBP16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 PKD2L1Q9P0L9 805 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 VPS54Q9P1Q0 977 aa16.69■□□□□ 0.26
PPP1CA-201ENST00000312989 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 M0R2N6 131 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 NOP56O00567 594 aaKnown RBP16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 DHX15O43143 795 aaKnown RBP16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 NBNO60934 754 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 CXCL10P02778 98 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 CKBP12277 381 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 RFC2P35250 354 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 TCF7P36402 384 aaPredicted RBP16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 SP4Q02446 784 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 BFSP2Q13515 415 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 LENG9Q96B70 501 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 AIFM3Q96NN9 605 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 SEMA6BQ9H3T3 888 aa16.68■□□□□ 0.26
PPP1CA-201ENST00000312989 DTNBO60941 627 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 LGR5O75473 907 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms