RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SYN1P17600 705 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 USP11P51784 963 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 FOSBP53539 338 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 PSMC6P62333 389 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 PTPN11Q06124 597 aaPredicted RBP22.52■■□□□ 1.2
VEGFB-201ENST00000309422 HSDL1Q3SXM5 330 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 NFRKBQ6P4R8 1299 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 TBCKQ8TEA7 893 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 C8orf76Q96K31 380 aa22.52■■□□□ 1.2
VEGFB-201ENST00000309422 KIAA1217Q5T5P2 1943 aa22.52■■□□□ 1.19
VEGFB-201ENST00000309422 ZNF286BP0CG31 522 aa22.51■■□□□ 1.19
VEGFB-201ENST00000309422 KCNA2P16389 499 aa22.51■■□□□ 1.19
VEGFB-201ENST00000309422 SP2Q02086 613 aa22.51■■□□□ 1.19
VEGFB-201ENST00000309422 PRR16Q569H4 304 aa22.51■■□□□ 1.19
VEGFB-201ENST00000309422 ZNF577Q9BSK1 485 aa22.51■■□□□ 1.19
VEGFB-201ENST00000309422 AZI2Q9H6S1 392 aa22.51■■□□□ 1.19
VEGFB-201ENST00000309422 NFASCO94856 1347 aa22.51■■□□□ 1.19
VEGFB-201ENST00000309422 MEIS1O00470 390 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 F2P00734 622 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 RAG1P15918 1043 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 SEMA3FQ13275 785 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 MFSD10Q14728 455 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 TNPO1Q92973 898 aaKnown RBP22.5■■□□□ 1.19
VEGFB-201ENST00000309422 AGO4Q9HCK5 861 aaKnown RBP22.5■■□□□ 1.19
VEGFB-201ENST00000309422 PDLIM7Q9NR12 457 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 SLC9A2Q9UBY0 812 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.5■■□□□ 1.19
VEGFB-201ENST00000309422 PSEN2P49810 448 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 NBPF20Q3BBV1 942 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 FAM126BQ8IXS8 530 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 CCDC155Q8N6L0 562 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 SEPT1Q8WYJ6 367 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 TMX3Q96JJ7 454 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 GPR20Q99678 358 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 TBC1D22BQ9NU19 505 aa22.5■■□□□ 1.19
VEGFB-201ENST00000309422 FAM86B1E9PN63 330 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 IPO5O00410 1097 aaKnown RBP22.49■■□□□ 1.19
VEGFB-201ENST00000309422 MARCH6O60337 910 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 MMP1P03956 469 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 LGALS2P05162 132 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 FAM86B2P0C5J1 330 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 HOXD8P13378 290 aaPredicted RBP22.49■■□□□ 1.19
VEGFB-201ENST00000309422 FDPSP14324 419 aaKnown RBP22.49■■□□□ 1.19
VEGFB-201ENST00000309422 CIITAP33076 1130 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 CDK7P50613 346 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 KIAA0753Q2KHM9 967 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 UTP14CQ5TAP6 766 aaKnown RBP22.49■■□□□ 1.19
VEGFB-201ENST00000309422 PIK3AP1Q6ZUJ8 805 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 NEK8Q86SG6 692 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 GLG1Q92896 1179 aa22.49■■□□□ 1.19
VEGFB-201ENST00000309422 GCFC2P16383 781 aaKnown RBP22.48■■□□□ 1.19
VEGFB-201ENST00000309422 TCF7P36402 384 aaPredicted RBP22.48■■□□□ 1.19
VEGFB-201ENST00000309422 LETM2Q2VYF4 491 aa22.48■■□□□ 1.19
VEGFB-201ENST00000309422 KRT40Q6A162 431 aa22.48■■□□□ 1.19
VEGFB-201ENST00000309422 CHRDL2Q6WN34 429 aa22.48■■□□□ 1.19
VEGFB-201ENST00000309422 DIS3L2Q8IYB7 885 aaKnown RBP22.48■■□□□ 1.19
VEGFB-201ENST00000309422 SLC43A3Q8NBI5 491 aa22.48■■□□□ 1.19
VEGFB-201ENST00000309422 CYP2W1Q8TAV3 490 aa22.48■■□□□ 1.19
VEGFB-201ENST00000309422 H3BRB1 525 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 DDX39AO00148 427 aaKnown RBP22.47■■□□□ 1.19
VEGFB-201ENST00000309422 ATP9AO75110 1047 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 ARP10275 920 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 GNAT1P11488 350 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 FAAP100Q0VG06 881 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 ST3GAL1Q11201 340 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 INF2Q27J81 1249 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 MOXD1Q6UVY6 613 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 CRYGNQ8WXF5 182 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 TUT1Q9H6E5 874 aaKnown RBP22.47■■□□□ 1.19
VEGFB-201ENST00000309422 SMC3Q9UQE7 1217 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 PDE4DIPQ5VU43 2346 aa22.47■■□□□ 1.19
VEGFB-201ENST00000309422 TNRC18O15417 2968 aaPredicted RBP22.47■■□□□ 1.19
VEGFB-201ENST00000309422 KIAA0355O15063 1070 aa22.46■■□□□ 1.19
VEGFB-201ENST00000309422 MDM2Q00987 491 aaPredicted RBP22.46■■□□□ 1.19
VEGFB-201ENST00000309422 KRT76Q01546 638 aa22.46■■□□□ 1.19
VEGFB-201ENST00000309422 FAM160B1Q5W0V3 765 aa22.46■■□□□ 1.19
VEGFB-201ENST00000309422 MIS18BP1Q6P0N0 1132 aa22.46■■□□□ 1.19
VEGFB-201ENST00000309422 SMARCAD1Q9H4L7 1026 aa22.46■■□□□ 1.19
VEGFB-201ENST00000309422 ERAP1Q9NZ08 941 aa22.46■■□□□ 1.19
VEGFB-201ENST00000309422 DDX25Q9UHL0 483 aaKnown RBP22.46■■□□□ 1.19
VEGFB-201ENST00000309422 SAMM50Q9Y512 469 aa22.46■■□□□ 1.19
VEGFB-201ENST00000309422 IGLV3-22A0A075B6J6 115 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 M0R2N6 131 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 BACH1O14867 736 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 B4GALT4O60513 344 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 GAS7O60861 476 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 DTNBO60941 627 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 MAGEA10P43363 369 aaPredicted RBP22.45■■□□□ 1.18
VEGFB-201ENST00000309422 SESTD1Q86VW0 696 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 SMAP1Q8IYB5 467 aaPredicted RBP22.45■■□□□ 1.18
VEGFB-201ENST00000309422 UBE2OQ9C0C9 1292 aaKnown RBP22.45■■□□□ 1.18
VEGFB-201ENST00000309422 HIPK3Q9H422 1215 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 GJB4Q9NTQ9 266 aa22.45■■□□□ 1.18
VEGFB-201ENST00000309422 H3BQV1 296 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 CCNT1O60563 726 aaKnown RBP22.44■■□□□ 1.18
VEGFB-201ENST00000309422 ACTR2P61160 394 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 GUCY1B3Q02153 619 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 BFSP2Q13515 415 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 NPY5RQ15761 445 aa22.44■■□□□ 1.18
VEGFB-201ENST00000309422 PTGISQ16647 500 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms