RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 HEATR3Q7Z4Q2 680 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 CCDC83Q8IWF9 413 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 TRMT44Q8IYL2 757 aaKnown RBP9.36□□□□□ -0.91
CHD6-201ENST00000309279 RAET1EQ8TD07 263 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 MAML3Q96JK9 1138 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 FGD4Q96M96 766 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 MPHOSPH6Q99547 160 aaKnown RBP9.36□□□□□ -0.91
CHD6-201ENST00000309279 PSTPIP2Q9H939 334 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 ESYT2A0FGR8 921 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 PTPDC1A2A3K4 754 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 PPP1R12AO14974 1030 aaPredicted RBP9.35□□□□□ -0.91
CHD6-201ENST00000309279 ADCY3O60266 1144 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 ANP32AP39687 249 aaKnown RBP9.35□□□□□ -0.91
CHD6-201ENST00000309279 CNTN2Q02246 1040 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 RBL2Q08999 1139 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 CUL4AQ13619 759 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 SLC30A10Q6XR72 485 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 SLAIN1Q8ND83 568 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 SYTL5Q8TDW5 730 aaPredicted RBP9.35□□□□□ -0.91
CHD6-201ENST00000309279 SHISA4Q96DD7 197 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 ZMYND12Q9H0C1 365 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 GLT8D2Q9H1C3 349 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
CHD6-201ENST00000309279 MRVI1Q9Y6F6 885 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 MCM3APO60318 1980 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 ASTN1O14525 1302 aa9.35□□□□□ -0.91
CHD6-201ENST00000309279 SOWAHBA6NEL2 793 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 GCOM1H8Y6P7 765 aaPredicted RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 SCAMP3O14828 347 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 JAK2O60674 1132 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 DNAJC6O75061 913 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 CFBP00751 764 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 POLR2MP0CAP2 368 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 GRK4P32298 578 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 MRPL12P52815 198 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 NAPAP54920 295 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 HMGN5P82970 282 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 ODR4Q5SWX8 454 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 COL13A1Q5TAT6 717 aaPredicted RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 DNERQ8NFT8 737 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 CCDC12Q8WUD4 166 aaPredicted RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 TRIB2Q92519 343 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 WASF1Q92558 559 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 TSC1Q92574 1164 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 REPIN1Q9BWE0 567 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 CXorf56Q9H5V9 222 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 RIC8AQ9NPQ8 531 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 FLRT1Q9NZU1 646 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 COL20A1Q9P218 1284 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 ADD3Q9UEY8 706 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 SMC3Q9UQE7 1217 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 SMCO2A6NFE2 343 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 K7ELQ4 463 aaPredicted RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 HMGCRP04035 888 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 CALML3P27482 149 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 GNA11P29992 359 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 AMPD3Q01432 767 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 PSMD2Q13200 908 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 CCL14Q16627 93 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 LONRF1Q17RB8 773 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 MAP3K21Q5TCX8 1036 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 LARP1BQ659C4 914 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 USP17L6PQ6QN14 398 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 KRT77Q7Z794 578 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 CCDC148Q8NFR7 591 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 CUL5Q93034 780 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 BORCS6Q96GS4 357 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 AIFM3Q96NN9 605 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
CHD6-201ENST00000309279 TAAR1Q96RJ0 339 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 MCOLN1Q9GZU1 580 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 VPS54Q9P1Q0 977 aa9.34□□□□□ -0.91
CHD6-201ENST00000309279 FRMPD4Q14CM0 1322 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 ASB14A6NK59 587 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 DTNBO60941 627 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 ELNP15502 786 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 EDNRBP24530 442 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 HOXA13P31271 388 aaPredicted RBP9.33□□□□□ -0.92
CHD6-201ENST00000309279 GNALP38405 381 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 ALDH5A1P51649 535 aaPredicted RBP9.33□□□□□ -0.92
CHD6-201ENST00000309279 ADCY7P51828 1080 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 NPY5RQ15761 445 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 SLC9C1Q4G0N8 1177 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 CCDC92Q53HC0 331 aaPredicted RBP9.33□□□□□ -0.92
CHD6-201ENST00000309279 GALNT17Q6IS24 598 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 NSUN6Q8TEA1 469 aaKnown RBP9.33□□□□□ -0.92
CHD6-201ENST00000309279 PPM1EQ8WY54 764 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 INTS4Q96HW7 963 aaKnown RBP9.33□□□□□ -0.92
CHD6-201ENST00000309279 IWS1Q96ST2 819 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 RMDN3Q96TC7 470 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 ALG1Q9BT22 464 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 C6orf50Q9HD87 102 aa9.33□□□□□ -0.92
CHD6-201ENST00000309279 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.33□□□□□ -0.92
CHD6-201ENST00000309279 M0R2N6 131 aa9.32□□□□□ -0.92
CHD6-201ENST00000309279 SNAI1O95863 264 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms