RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TEX33O43247 280 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 EHHADHQ08426 723 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 KCTD2Q14681 263 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 FEM1BQ9UK73 627 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 UBE2Q2LH0YL09 131 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 USP11P51784 963 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 LONRF2Q1L5Z9 754 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 ADD3Q9UEY8 706 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 SFI1A8K8P3 1242 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 KIF4AO95239 1232 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 ST3GAL1Q11201 340 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 CCDC105Q8IYK2 499 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 KMT5AQ9NQR1 393 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 GOLGA6CA6NDK9 693 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 EBAG9O00559 213 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 GOLGA6DP0CG33 693 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 PDHBP11177 359 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 OAS2P29728 719 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 CCND2P30279 289 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 FAM160B1Q5W0V3 765 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 RNF207Q6ZRF8 634 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 ADGRA1Q86SQ6 560 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 PCIF1Q9H4Z3 704 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 GOLGA6AQ9NYA3 693 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 GCNT4Q9P109 453 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 PDS5AQ29RF7 1337 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 PDE6CP51160 858 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 GPR162Q16538 588 aa12.49□□□□□ -0.41
PCDHGC3-201ENST00000308177 STXBP3O00186 592 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 KRIT1O00522 736 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 PROM2Q8N271 834 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 FBXL16Q8N461 479 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 NSRP1Q9H0G5 558 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 LMNB1P20700 586 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 COASYQ13057 564 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 KCNB1Q14721 858 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 GUF1Q8N442 669 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 NT5C1BQ96P26 610 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 IQCGQ9H095 443 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 ABHD10Q9NUJ1 306 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 ANKFY1Q9P2R3 1169 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 HPDP32754 393 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 KIF11P52732 1056 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 SLC8A3P57103 927 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 PDIA5Q14554 519 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 VGLL2Q8N8G2 317 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 DPF2Q92785 391 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 NYAP2Q9P242 653 aa12.48□□□□□ -0.41
PCDHGC3-201ENST00000308177 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 TOGARAM2Q6ZUX3 1019 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 DHX37Q8IY37 1157 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 RMDN3Q96TC7 470 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 TRIM9Q9C026 710 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 PTPAQ15257 358 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 MIS18BP1Q6P0N0 1132 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 RAVER2Q9HCJ3 691 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 ATP2C2O75185 946 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 LRRN2O75325 713 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 ENTPD3O75355 529 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 NDUFB10O96000 172 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 SERPING1P05155 500 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 PRELPP51888 382 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 YWHAEP62258 255 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 GRIN1Q05586 938 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 FMR1Q06787 632 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 SEC23AQ15436 765 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 CPLX4Q7Z7G2 160 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZMYND12Q9H0C1 365 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 POLLQ9UGP5 575 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 MFAP3P55082 362 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 DPYDQ12882 1025 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 SPP2Q13103 211 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 NTRK3Q16288 839 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 RUFY4Q6ZNE9 571 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 SMAP1Q8IYB5 467 aaPredicted RBP12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 RAB17Q9H0T7 212 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 ABCB11O95342 1321 aa12.47□□□□□ -0.41
PCDHGC3-201ENST00000308177 STAT3P40763 770 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 PPFIA1Q13136 1202 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 MTMR1Q13613 665 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms