RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 MMP19Q99542 508 aa14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 RIT2Q99578 217 aa14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 MTRQ99707 1265 aa14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 BPIFA3Q9BQP9 254 aa14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 NAT10Q9H0A0 1025 aaKnown RBP14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 JADE2Q9NQC1 790 aa14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 RNF186Q9NXI6 227 aa14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 VAV3Q9UKW4 847 aa14.41□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 POTEMA6NI47 508 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 MAFGO15525 162 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 STRNO43815 780 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 PSMD10O75832 226 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 ITGB5P18084 799 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 PLCG1P19174 1290 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 ZNF165P49910 485 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 UBXN2AP68543 259 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 PPP2R5CQ13362 524 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 KCTD2Q14681 263 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 CT47A1Q5JQC4 288 aaPredicted RBP14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 DNERQ8NFT8 737 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 NT5C3AQ9H0P0 336 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 PLXNB2O15031 1838 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 KDM3AQ9Y4C1 1321 aa14.4□□□□□ -0.1
SHANK2-AS3-201ENST00000307548 STAM2O75886 525 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 EIF2AK2P19525 551 aaKnown RBP14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 EDNRBP24530 442 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 MORC3Q14149 939 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 GRB14Q14449 540 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 B3GNT9Q6UX72 402 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 OTOP1Q7RTM1 612 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 PLEKHH3Q7Z736 793 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 RNF214Q8ND24 703 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 RASSF8Q8NHQ8 419 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ERMNQ8TAM6 284 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 SNX29Q8TEQ0 813 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 IWS1Q96ST2 819 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 WDR11Q9BZH6 1224 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 DNAJC25Q9H1X3 360 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 CBX8Q9HC52 389 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 MAN1B1Q9UKM7 699 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 PGK2P07205 417 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 NR3C2P08235 984 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ARP10275 920 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 MUTP22033 750 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 RPA1P27694 616 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ADORA2AP29274 412 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 CTGFP29279 349 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 CCND2P30279 289 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 AFMP43652 599 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 AMPD3Q01432 767 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 IQCB1Q15051 598 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ZNF792Q3KQV3 632 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 WDR78Q5VTH9 848 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 HAUS3Q68CZ6 603 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 CNNM4Q6P4Q7 775 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 GRAMD1CQ8IYS0 662 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 MLKLQ8NB16 471 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 LRRC15Q8TF66 581 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 GJA10Q969M2 543 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 C7orf25Q9BPX7 421 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 NUDT12Q9BQG2 462 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 POLR3CQ9BUI4 534 aaPredicted RBP14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 BLOC1S4Q9NUP1 217 aa14.39□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 IPO5O00410 1097 aaKnown RBP14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 COBLO75128 1261 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 TBC1D8O95759 1140 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ALDH5A1P51649 535 aaPredicted RBP14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 DPCR1Q3MIW9 517 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 MORN1Q5T089 497 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 C11orf57Q6ZUT1 292 aaPredicted RBP14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 GPRASP2Q96D09 838 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 CDK5RAP3Q96JB5 506 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ZNF577Q9BSK1 485 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 GTPBP4Q9BZE4 634 aaKnown RBP14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 LRRC27Q9C0I9 530 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 KCNH7Q9NS40 1196 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ZNFX1Q9P2E3 1918 aaKnown RBP14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 BIN1O00499 593 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 TRPA1O75762 1119 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 BMP6P22004 513 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 CCT6AP40227 531 aaKnown RBP14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 KCNB1Q14721 858 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 LRCH2Q5VUJ6 765 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 SV2BQ7L1I2 683 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 MORC4Q8TE76 937 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 RAD54LQ92698 747 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 USP6NLQ92738 828 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 INPP4AQ96PE3 977 aaPredicted RBP14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 AGO4Q9HCK5 861 aaKnown RBP14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 TBC1D22BQ9NU19 505 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 RMND1Q9NWS8 449 aa14.37□□□□□ -0.11
SHANK2-AS3-201ENST00000307548 ADD3Q9UEY8 706 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms