RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 SP2Q02086 613 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NR5A1Q13285 461 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 INF2Q27J81 1249 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PRR16Q569H4 304 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MYSM1Q5VVJ2 828 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SLC39A5Q6ZMH5 540 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 OXER1Q8TDS5 423 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ZNF577Q9BSK1 485 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MTG1Q9BT17 334 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 KCNH7Q9NS40 1196 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ATP11BQ9Y2G3 1177 aa12.49□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NFASCO94856 1347 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MEIS1O00470 390 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 HSP90AA1P07900 732 aaKnown RBP12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ARP10275 920 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 GCFC2P16383 781 aaKnown RBP12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CHMP4BP1P59074 171 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CUL4AQ13619 759 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 LRRC26Q2I0M4 334 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 HSDL1Q3SXM5 330 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MOXD1Q6UVY6 613 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 C7orf61Q8IZ16 206 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 FBXO18Q8NFZ0 1043 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CYP2W1Q8TAV3 490 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CRYGNQ8WXF5 182 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SNX21Q969T3 373 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SEZ6LQ9BYH1 1024 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 AGO4Q9HCK5 861 aaKnown RBP12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 JPH1Q9HDC5 661 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TRIP12Q14669 1992 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MYH15Q9Y2K3 1946 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 IGLV3-22A0A075B6J6 115 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 BTBD18B2RXH4 712 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 DDX39AO00148 427 aaKnown RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 IPO5O00410 1097 aaKnown RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TLR3O15455 904 aaKnown RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 CCNT1O60563 726 aaKnown RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ZNF286BP0CG31 522 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ITGA7Q13683 1181 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SNX17Q15036 470 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TRIM60Q495X7 471 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 FAM47CQ5HY64 1035 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PRKAG2Q9UGJ0 569 aa12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ZNF215Q9UL58 517 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 LTBP2Q14767 1821 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 DCDC2CA8MYV0 355 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ARVCFO00192 962 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MARCH6O60337 910 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PQBP1O60828 265 aaKnown RBP12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 ATP9AO75110 1047 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PPFIA4O75335 1185 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TDP2O95551 362 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PDCP20941 246 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PSMC6P62333 389 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 Q4G0T1 1027 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 MCTP1Q6DN14 999 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 SEPT1Q8WYJ6 367 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 INTS4Q96HW7 963 aaKnown RBP12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 GPR20Q99678 358 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PRDM5Q9NQX1 630 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 TBC1D22BQ9NU19 505 aa12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.41
CSPG4P1Y-201ENST00000306641 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TANC1Q9C0D5 1861 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CYP3A7-CYP3A51PA0A087WV96 503 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 GAS7O60861 476 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 F2P00734 622 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 LGALS2P05162 132 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 HOXD8P13378 290 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CYP3A7P24462 503 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PSEN2P49810 448 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 KRT76Q01546 638 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ITGB3BPQ13352 177 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 MFSD10Q14728 455 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 UTP14CQ5TAP6 766 aaKnown RBP12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PPP4R3AQ6IN85 833 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TNFRSF25Q93038 417 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 EMSYQ7Z589 1322 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 MSH4O15457 936 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CLTBP09497 229 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 KIAA0753Q2KHM9 967 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 NBPF20Q3BBV1 942 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 EARS2Q5JPH6 523 aaKnown RBP12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 LRCH2Q5VUJ6 765 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 MIS18BP1Q6P0N0 1132 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms