RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 MSH6P52701 1360 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 GOLGA8SH3BPF8 625 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 FAM173BQ6P4H8 233 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 SMAD5Q99717 465 aaKnown RBP14.41□□□□□ -0.1
TRIM56-201ENST00000306085 TSR3Q9UJK0 312 aaKnown RBP14.41□□□□□ -0.1
TRIM56-201ENST00000306085 SYNJ2O15056 1496 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 PCDHB15Q9Y5E8 787 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 Q3C1V9 767 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 OLFML2BQ68BL8 750 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 EEF2KMTQ96G04 330 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 RTCBQ9Y3I0 505 aaKnown RBP14.41□□□□□ -0.1
TRIM56-201ENST00000306085 EXOC3L4Q17RC7 722 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 KSR2Q6VAB6 950 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 LUZP2Q86TE4 346 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 FAM149B1Q96BN6 582 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 APOBEC2Q9Y235 224 aaKnown RBP14.41□□□□□ -0.1
TRIM56-201ENST00000306085 GOLGA8FQ08AF8 430 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 FMO2Q99518 471 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 SELENONQ9NZV5 590 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 KCNG1Q9UIX4 513 aa14.41□□□□□ -0.1
TRIM56-201ENST00000306085 LRRN2O75325 713 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 TMEM60Q9H2L4 133 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 TPCN1Q9ULQ1 816 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 PPARGP37231 505 aaPredicted RBP14.4□□□□□ -0.1
TRIM56-201ENST00000306085 CNGA3Q16281 694 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 CEP85Q6P2H3 762 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 RABGGTAQ92696 567 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 ZFP42Q96MM3 310 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 POGZQ7Z3K3 1410 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 DTNBO60941 627 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 GUCY1A3Q02108 690 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 EFTUD2Q15029 972 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM56-201ENST00000306085 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 RUSC2Q8N2Y8 1516 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 C1orf228Q6PIY5 440 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 BTBD6Q96KE9 485 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 CA4P22748 312 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 PTK2Q05397 1052 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 ABI1Q8IZP0 508 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 SLC8A2Q9UPR5 921 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 IBTKQ9P2D0 1353 aaPredicted RBP14.4□□□□□ -0.1
TRIM56-201ENST00000306085 RUBCNLQ9H714 662 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 SOS1Q07889 1333 aaPredicted RBP14.4□□□□□ -0.1
TRIM56-201ENST00000306085 LRRC8AQ8IWT6 810 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 PHF8Q9UPP1 1060 aa14.4□□□□□ -0.1
TRIM56-201ENST00000306085 PAMP19021 973 aa14.4□□□□□ -0.11
TRIM56-201ENST00000306085 SLC39A2Q9NP94 309 aa14.4□□□□□ -0.11
TRIM56-201ENST00000306085 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 FGD2Q7Z6J4 655 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 DDX25Q9UHL0 483 aaKnown RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 ARL4AP40617 200 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 SLC7A5Q01650 507 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 TRIM71Q2Q1W2 868 aaKnown RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 ARMCX5Q6P1M9 558 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 PYROXD1Q8WU10 500 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 TTC17Q96AE7 1141 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 ZMYND12Q9H0C1 365 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 KLHL31Q9H511 634 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 SLC5A4Q9NY91 659 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 TBC1D10BQ4KMP7 808 aaPredicted RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 RARS2Q5T160 578 aaKnown RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 RRM2BQ7LG56 351 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 NEK8Q86SG6 692 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 COBLO75128 1261 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 GPAA1O43292 621 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 RHOBTB1O94844 696 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 NR5A1Q13285 461 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 CYTH1Q15438 398 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 PPP1R13BQ96KQ4 1090 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 FRMPD2Q68DX3 1309 aaPredicted RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 TROQ12816 1431 aaPredicted RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 H2AFZP0C0S5 128 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 NUGGCQ68CJ6 796 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 H2AFVQ71UI9 128 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 EPN1Q9Y6I3 576 aaPredicted RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 PGRMC1O00264 195 aaKnown RBP14.39□□□□□ -0.11
TRIM56-201ENST00000306085 MED21Q13503 144 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 RFX8Q6ZV50 586 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 CCHCR1Q8TD31 782 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 GINS4Q9BRT9 223 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 SEL1LQ9UBV2 794 aa14.39□□□□□ -0.11
TRIM56-201ENST00000306085 SRGAP2CP0DJJ0 459 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 CAPRIN2Q6IMN6 1127 aaKnown RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ANKRD36BP1Q96IX9 119 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 SERTAD1Q9UHV2 236 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 TMEM191CA6NGB0 347 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 PRPF4O43172 522 aaKnown RBP eCLIP14.38□□□□□ -0.112e-9■■□□□ 13.2
TRIM56-201ENST00000306085 MMEP08473 750 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 MLH1P40692 756 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 NBPF26B4DH59 902 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 NBPF15Q8N660 670 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF513Q8N8E2 541 aaPredicted RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 MRPL40Q9NQ50 206 aaKnown RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 PAPOLBQ9NRJ5 636 aaKnown RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 CCDC78A2IDD5 438 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 GOLGA8RI6L899 631 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ALDH1L1O75891 902 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 TEDDM1Q5T9Z0 273 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms