RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SRP68Q9UHB9 627 aaKnown RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 XDHP47989 1333 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 TTLL1O95922 423 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 GAS8O95995 478 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 KLK7P49862 253 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 FBXO11Q86XK2 927 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 CPXCR1Q8N123 301 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 HNRNPLLQ8WVV9 542 aaKnown RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 TBC1D31Q96DN5 1066 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 PBKQ96KB5 322 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 FAM114A2Q9NRY5 505 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 LEMD3Q9Y2U8 911 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 MYO5BQ9ULV0 1848 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 COL15A1P39059 1388 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 USP17L5A8MUK1 530 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 H3BQF6 201 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 BACH1O14867 736 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 PRPF6O94906 941 aaKnown RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 SRGNP10124 158 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 KRT15P19012 456 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 SLCO1A2P46721 670 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 GLE1Q53GS7 698 aaKnown RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 GPATCH4Q5T3I0 446 aaKnown RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 TMC4Q7Z404 712 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 FAM186BQ8IYM0 893 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 PPM1KQ8N3J5 372 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 TEKT1Q969V4 418 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 GCFC2P16383 781 aaKnown RBP14.49□□□□□ -0.09
DDX54-201ENST00000306014 ZNF18P17022 549 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 VPS72Q15906 364 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 ODR4Q5SWX8 454 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 WDR78Q5VTH9 848 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 CCNI2Q6ZMN8 369 aaPredicted RBP14.49□□□□□ -0.09
DDX54-201ENST00000306014 MMS22LQ6ZRQ5 1243 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 DPH6Q7L8W6 267 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 FEZ2Q9UHY8 353 aaPredicted RBP14.49□□□□□ -0.09
DDX54-201ENST00000306014 BAZ2BQ9UIF8 2168 aaKnown RBP14.49□□□□□ -0.09
DDX54-201ENST00000306014 UBR1Q8IWV7 1749 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 HMGB1P1B2RPK0 211 aaPredicted RBP14.49□□□□□ -0.09
DDX54-201ENST00000306014 ORC4O43929 436 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 ATP2B4P23634 1241 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 DOK7Q18PE1 504 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 CCDC127Q96BQ5 260 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 ARHGEF10LQ9HCE6 1279 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 CEP72Q9P209 647 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 PCDHA6Q9UN73 950 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 PCDHA8Q9Y5H6 950 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 SASH3O75995 380 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 TFRCP02786 760 aaKnown RBP14.49□□□□□ -0.09
DDX54-201ENST00000306014 LMNB1P20700 586 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 GRM4Q14833 912 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 SNCBQ16143 134 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 SH2D3CQ8N5H7 860 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 VIPAS39Q9H9C1 493 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 SERPINB13Q9UIV8 391 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 HPCAL4Q9UM19 191 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 L1RE1Q9UN81 338 aa14.49□□□□□ -0.09
DDX54-201ENST00000306014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.48□□□□□ -0.09
DDX54-201ENST00000306014 PVALEFA0A1B0GWK0 134 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 KCNQ2O43526 872 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 CERKLQ49MI3 558 aaPredicted RBP14.48□□□□□ -0.09
DDX54-201ENST00000306014 RSRC2Q7L4I2 434 aaKnown RBP14.48□□□□□ -0.09
DDX54-201ENST00000306014 KIAA0825Q8IV33 1275 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 NLGN1Q8N2Q7 840 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 CCDC197Q8NCU1 140 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 TCP11Q8WWU5 503 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 KIFC2Q96AC6 838 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 TMEM60Q9H2L4 133 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 E9PMD0 336 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 PSMD14O00487 310 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 ICA1Q05084 483 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 FBXL16Q8N461 479 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 MS4A14Q96JA4 679 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 H0YIN7 160 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 K7ENM7 598 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 TDP2O95551 362 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 MYCLP12524 364 aaPredicted RBP14.48□□□□□ -0.09
DDX54-201ENST00000306014 PCK1P35558 622 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 CCDC93Q567U6 631 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 PSD3Q9NYI0 1048 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 OVOS2A0A0G2JMS6 1433 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 TROAPQ12815 778 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 GUF1Q8N442 669 aaKnown RBP14.48□□□□□ -0.09
DDX54-201ENST00000306014 RNF10Q8N5U6 811 aaKnown RBP14.48□□□□□ -0.09
DDX54-201ENST00000306014 FMO2Q99518 471 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 AMNQ9BXJ7 453 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 DDX47Q9H0S4 455 aaKnown RBP14.48□□□□□ -0.09
DDX54-201ENST00000306014 CD2APQ9Y5K6 639 aa14.48□□□□□ -0.09
DDX54-201ENST00000306014 SPATA31A1Q5TZJ5 1347 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 RHOBTB3O94955 611 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 FGGP02679 453 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 ADCY8P40145 1251 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 UBXN2AP68543 259 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 MUM1L1Q5H9M0 696 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 NSUN4Q96CB9 384 aaKnown RBP14.47□□□□□ -0.09
DDX54-201ENST00000306014 CEP95Q96GE4 821 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 PSMC2P35998 433 aaKnown RBP14.47□□□□□ -0.09
DDX54-201ENST00000306014 ADCY1Q08828 1119 aa14.47□□□□□ -0.09
DDX54-201ENST00000306014 KCNH2Q12809 1159 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms