RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 CCDC39Q9UFE4 941 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 PASKQ96RG2 1323 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 MYMKA6NI61 221 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 DDX39AO00148 427 aaKnown RBP6.49□□□□□ -1.37
TTC39C-201ENST00000304621 KIF3CO14782 793 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 CHMP2AO43633 222 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 GTPBP6O43824 516 aaPredicted RBP6.49□□□□□ -1.37
TTC39C-201ENST00000304621 ATP9AO75110 1047 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 COBLO75128 1261 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 HUNKP57058 714 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 NCAPHQ15003 741 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 LRCH2Q5VUJ6 765 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 KANK3Q6NY19 840 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 NCAPG2Q86XI2 1143 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 CATSPER3Q86XQ3 398 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 SAMD3Q8N6K7 520 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 MB21D1Q8N884 522 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 CHST13Q8NET6 341 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 RAD54LQ92698 747 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 FAM20AQ96MK3 541 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 ZNF577Q9BSK1 485 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 HSD3B7Q9H2F3 369 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 JADE2Q9NQC1 790 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 PNMA2Q9UL42 364 aa6.49□□□□□ -1.37
TTC39C-201ENST00000304621 IPO5O00410 1097 aaKnown RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 ZBTB39O15060 712 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 RPN1P04843 607 aaKnown RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 PGK2P07205 417 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 NR3C2P08235 984 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 CETPP11597 493 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 OSBPP22059 807 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 GTF2A2P52657 109 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 CYP4A11Q02928 519 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 PPP2R5CQ13362 524 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 KRT79Q5XKE5 535 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 VSIG10LQ86VR7 867 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 HPS3Q969F9 1004 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 CALML4Q96GE6 196 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 EIF2AK1Q9BQI3 630 aaKnown RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 TRIM9Q9C026 710 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 EFCC1Q9HA90 598 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 KIAA1024Q9UPX6 916 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 GDAQ9Y2T3 454 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 RABGAP1Q9Y3P9 1069 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 NPHP3-ACAD11A0A0J9YXS1 232 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 TESPA1A2RU30 521 aaPredicted RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 PPP1R3GB7ZBB8 358 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 SORBS3O60504 671 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 GAS7O60861 476 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 CCNE2O96020 404 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 BCRP11274 1271 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 CCND2P30279 289 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 ERVK-9P63128 1117 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 ERVK-24P63145 666 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 SETQ01105 290 aaPredicted RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 MTMR1Q13613 665 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 CTTNQ14247 550 aaKnown RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 UVSSAQ2YD98 709 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 KMT5BQ4FZB7 885 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 NIPA1Q7RTP0 329 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 ANKRD23Q86SG2 305 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 TRMT44Q8IYL2 757 aaKnown RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 ANKRD35Q8N283 1001 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 ANKRD13CQ8N6S4 541 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 FAM133AQ8N9E0 248 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 LARP4BQ92615 738 aaKnown RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 DYDC2Q96IM9 177 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 ZIC5Q96T25 663 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 C7orf25Q9BPX7 421 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 PYM1Q9BRP8 204 aaKnown RBP6.48□□□□□ -1.37
TTC39C-201ENST00000304621 RAB34Q9BZG1 259 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 STK17AQ9UEE5 414 aa6.48□□□□□ -1.37
TTC39C-201ENST00000304621 DOCK5Q9H7D0 1870 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 DNAJC25-GNG10A0A024R161 153 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 IGF2BP3O00425 579 aaKnown RBP eCLIP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 ECM2O94769 699 aaPredicted RBP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 SLITRK3O94933 977 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 SMC2O95347 1197 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 ZBTB48P10074 688 aaPredicted RBP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 RPA1P27694 616 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 ALDH5A1P51649 535 aaPredicted RBP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 SLC12A3P55017 1021 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 SP2Q02086 613 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 PABPC4Q13310 644 aaKnown RBP eCLIP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 SAPCD2Q86UD0 394 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 IFNL1Q8IU54 200 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 NSUN6Q8TEA1 469 aaKnown RBP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 CDK5RAP3Q96JB5 506 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 DCBLD2Q96PD2 775 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 INPP4AQ96PE3 977 aaPredicted RBP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 GSDMAQ96QA5 445 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 HSD17B14Q9BPX1 270 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 BPIFA3Q9BQP9 254 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 TEKT3Q9BXF9 490 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 CUEDC2Q9H467 287 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 HOOK1Q9UJC3 728 aaKnown RBP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 FAM155AB1AL88 458 aaPredicted RBP6.47□□□□□ -1.37
TTC39C-201ENST00000304621 PLA2G4BP0C869 781 aa6.47□□□□□ -1.37
TTC39C-201ENST00000304621 FCER1AP12319 257 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms