RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CTDNEP1O95476 244 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 CYP2C9P11712 490 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 FPGSQ05932 587 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
CLCC1-201ENST00000302500 FAM109BQ6ICB4 259 aaPredicted RBP12.93□□□□□ -0.34
CLCC1-201ENST00000302500 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 LENG9Q96B70 501 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 TMEM260Q9NX78 707 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 RTEL1Q9NZ71 1219 aa12.93□□□□□ -0.34
CLCC1-201ENST00000302500 MEIS1O00470 390 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 MBTPS1Q14703 1052 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 DGKDQ16760 1214 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 SYNE3Q6ZMZ3 975 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 MICAL3Q7RTP6 2002 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 DHX37Q8IY37 1157 aaKnown RBP12.92□□□□□ -0.34
CLCC1-201ENST00000302500 CUL5Q93034 780 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 PGBD1Q96JS3 809 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 PCYT2Q99447 389 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 LBHD1Q9BQE6 289 aaPredicted RBP12.92□□□□□ -0.34
CLCC1-201ENST00000302500 PPP1R12CQ9BZL4 782 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 HIPK3Q9H422 1215 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 JADE2Q9NQC1 790 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 TPCN1Q9ULQ1 816 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
CLCC1-201ENST00000302500 CCDC196A0A1B0GTZ2 297 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 GSTTP1A0A1W2PQM5 241 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 SMCO2A6NFE2 343 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 FAM86B1E9PN63 330 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 DHX15O43143 795 aaKnown RBP12.91□□□□□ -0.34
CLCC1-201ENST00000302500 LARGE1O95461 756 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 LGALS2P05162 132 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 CYP3A4P08684 503 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 FAM86B2P0C5J1 330 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 PSEN2P49810 448 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 NAPAP54920 295 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 SMAD3P84022 425 aaKnown RBP12.91□□□□□ -0.34
CLCC1-201ENST00000302500 SCRN1Q12765 414 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
CLCC1-201ENST00000302500 AP3B2Q13367 1082 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 TCTN1Q2MV58 587 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 CYFIP1Q7L576 1253 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 SPATA33Q96N06 139 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
CLCC1-201ENST00000302500 ANO3Q9BYT9 981 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 CXXC1Q9P0U4 656 aaPredicted RBP12.91□□□□□ -0.34
CLCC1-201ENST00000302500 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
CLCC1-201ENST00000302500 IGKV6D-21A0A0A0MT36 114 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 TLR3O15455 904 aaKnown RBP12.9□□□□□ -0.34
CLCC1-201ENST00000302500 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 LGR5O75473 907 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 ATG7O95352 703 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
CLCC1-201ENST00000302500 ZNF200P98182 395 aaPredicted RBP12.9□□□□□ -0.34
CLCC1-201ENST00000302500 NEDD9Q14511 834 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 MFSD10Q14728 455 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 GNPTABQ3T906 1256 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 NIPA1Q7RTP0 329 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 TRIM50Q86XT4 487 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 HERVK_113Q902F9 699 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 SCLYQ96I15 445 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 MXRA8Q9BRK3 442 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 TTYH1Q9H313 450 aaPredicted RBP12.9□□□□□ -0.34
CLCC1-201ENST00000302500 KCNH7Q9NS40 1196 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 MTMR10Q9NXD2 777 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 NFASCO94856 1347 aa12.9□□□□□ -0.34
CLCC1-201ENST00000302500 MAFGO15525 162 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 SORBS3O60504 671 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 PFKFB2O60825 505 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 FOSP01100 380 aaPredicted RBP12.89□□□□□ -0.35
CLCC1-201ENST00000302500 CXCL10P02778 98 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 IQCF3P0C7M6 154 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 SUPT20HL2P0C7V6 817 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 ARP10275 920 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
CLCC1-201ENST00000302500 CIITAP33076 1130 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 ADCY7P51828 1080 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 AK2P54819 239 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 CEP55Q53EZ4 464 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 BRDTQ58F21 947 aaPredicted RBP12.89□□□□□ -0.35
CLCC1-201ENST00000302500 ZNF365Q70YC5 407 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 Q7L0L9 218 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 SERINC5Q86VE9 423 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 VTI1AQ96AJ9 217 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 GUCD1Q96NT3 240 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 SH3GLB2Q9NR46 395 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 LOXHD1Q8IVV2 1947 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 EMSYQ7Z589 1322 aa12.89□□□□□ -0.35
CLCC1-201ENST00000302500 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 H3BRB1 525 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 CCNE2O96020 404 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 ACRP10323 421 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms