RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 PRR29P0C7W0 189 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 SHC4Q6S5L8 630 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 SESTD1Q86VW0 696 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 PCDHA13Q9Y5I0 950 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 RPAP1Q9BWH6 1393 aaPredicted RBP22.6■■□□□ 1.21
LTBP3-201ENST00000301873 TSPOAP1O95153 1857 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 GUCY1A2P33402 732 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 LRRC63Q05C16 580 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 RABL6Q3YEC7 729 aaPredicted RBP22.6■■□□□ 1.21
LTBP3-201ENST00000301873 SEPT14Q6ZU15 432 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 TOGARAM2Q6ZUX3 1019 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 CFAP74Q9C0B2 1584 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 M0QZ92 97 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 MAPK4P31152 587 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 DDIT3P35638 169 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 TBC1D9BQ66K14 1250 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 ZNF579Q8NAF0 562 aaKnown RBP22.6■■□□□ 1.21
LTBP3-201ENST00000301873 CCT6BQ92526 530 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 RIOK1Q9BRS2 568 aaKnown RBP22.6■■□□□ 1.21
LTBP3-201ENST00000301873 RIPOR2Q9Y4F9 1068 aa22.6■■□□□ 1.21
LTBP3-201ENST00000301873 ZCCHC11Q5TAX3 1644 aaKnown RBP22.59■■□□□ 1.21
LTBP3-201ENST00000301873 SYNJ2BP-COX16A0A087WUM0 186 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 GOLGA8SH3BPF8 625 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 EPHB4P54760 987 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 TSGA10IPQ3SY00 556 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 CYP4F22Q6NT55 531 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 ACCSQ96QU6 501 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 COX16Q9P0S2 106 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 TAF6LQ9Y6J9 622 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 GOLGA8IPA6NC78 632 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 GOLGA8JA6NMD2 632 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 CRCPO75575 148 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 ALX1Q15699 326 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 KRT27Q7Z3Y8 459 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 ADCY10Q96PN6 1610 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 PSMD2Q13200 908 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 TXNRD1Q16881 649 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 TDRD3Q9H7E2 651 aaKnown RBP22.59■■□□□ 1.21
LTBP3-201ENST00000301873 ABCB6Q9NP58 842 aa22.59■■□□□ 1.21
LTBP3-201ENST00000301873 GIPC1O14908 333 aa22.58■■□□□ 1.21
LTBP3-201ENST00000301873 TTBK2Q6IQ55 1244 aa22.58■■□□□ 1.21
LTBP3-201ENST00000301873 ATP2A3Q93084 1043 aa22.58■■□□□ 1.21
LTBP3-201ENST00000301873 APOL6Q9BWW8 343 aa22.58■■□□□ 1.21
LTBP3-201ENST00000301873 ATP8B1O43520 1251 aa22.58■■□□□ 1.21
LTBP3-201ENST00000301873 TFAMQ00059 246 aaKnown RBP22.58■■□□□ 1.21
LTBP3-201ENST00000301873 MTERF2Q49AM1 385 aa22.58■■□□□ 1.21
LTBP3-201ENST00000301873 FAM84BQ96KN1 310 aaPredicted RBP22.58■■□□□ 1.21
LTBP3-201ENST00000301873 NXF1Q9UBU9 619 aaKnown RBP22.58■■□□□ 1.21
LTBP3-201ENST00000301873 PNMA2Q9UL42 364 aa22.58■■□□□ 1.21
LTBP3-201ENST00000301873 USP27XA6NNY8 438 aa22.58■■□□□ 1.2
LTBP3-201ENST00000301873 NKX1-1Q15270 411 aaPredicted RBP22.58■■□□□ 1.2
LTBP3-201ENST00000301873 SGMS1Q86VZ5 419 aa22.58■■□□□ 1.2
LTBP3-201ENST00000301873 CDHR2Q9BYE9 1310 aa22.58■■□□□ 1.2
LTBP3-201ENST00000301873 DHX9Q08211 1270 aaKnown RBP22.58■■□□□ 1.2
LTBP3-201ENST00000301873 CASP8Q14790 479 aa22.58■■□□□ 1.2
LTBP3-201ENST00000301873 INTS9Q9NV88 658 aaKnown RBP22.58■■□□□ 1.2
LTBP3-201ENST00000301873 MAD1L1Q9Y6D9 718 aa22.58■■□□□ 1.2
LTBP3-201ENST00000301873 STK36Q9NRP7 1315 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 TROVE2P10155 538 aaKnown RBP eCLIP22.57■■□□□ 1.22e-6■■■□□ 16.6
LTBP3-201ENST00000301873 IFRD2Q12894 506 aaPredicted RBP22.57■■□□□ 1.2
LTBP3-201ENST00000301873 KCTD2Q14681 263 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 H7C0C1 242 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 SRGAP2O75044 1071 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 ATP5OP48047 213 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 TPD52P55327 224 aaPredicted RBP22.57■■□□□ 1.2
LTBP3-201ENST00000301873 EXOSC10Q01780 885 aaKnown RBP22.57■■□□□ 1.2
LTBP3-201ENST00000301873 AP1M1Q9BXS5 423 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 TYW1Q9NV66 732 aaKnown RBP22.57■■□□□ 1.2
LTBP3-201ENST00000301873 E9PMD0 336 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 SERPING1P05155 500 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 SLCO1A2P46721 670 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 SLC12A2P55011 1212 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 SEPT2Q15019 361 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 TRIM50Q86XT4 487 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 FAM149B1Q96BN6 582 aa22.57■■□□□ 1.2
LTBP3-201ENST00000301873 PNMA6AP0CW24 399 aaPredicted RBP22.56■■□□□ 1.2
LTBP3-201ENST00000301873 UNC13DQ70J99 1090 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 TMEM260Q9NX78 707 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 OSTNP61366 133 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 IFT88Q13099 833 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 PPP2R5AQ15172 486 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 TMEM206Q9H813 350 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 PFDN4Q9NQP4 134 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 IQGAP3Q86VI3 1631 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 CPDO75976 1380 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 LGALS16A8MUM7 142 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 CLTAP09496 248 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 SGO2Q562F6 1265 aa22.56■■□□□ 1.2
LTBP3-201ENST00000301873 USP17L10C9JJH3 530 aa22.55■■□□□ 1.2
LTBP3-201ENST00000301873 TMEM179Q6ZVK1 233 aa22.55■■□□□ 1.2
LTBP3-201ENST00000301873 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
LTBP3-201ENST00000301873 EPC1Q9H2F5 836 aa22.55■■□□□ 1.2
LTBP3-201ENST00000301873 MED14O60244 1454 aa22.55■■□□□ 1.2
LTBP3-201ENST00000301873 C21orf2O43822 256 aa22.55■■□□□ 1.2
LTBP3-201ENST00000301873 GYS2P54840 703 aa22.55■■□□□ 1.2
LTBP3-201ENST00000301873 APBA1Q02410 837 aa22.55■■□□□ 1.2
LTBP3-201ENST00000301873 ZKSCAN8Q15776 578 aaPredicted RBP22.55■■□□□ 1.2
LTBP3-201ENST00000301873 DPY19L2Q6NUT2 758 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms