RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ZNF277Q9NRM2 450 aaPredicted RBP17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 KCNA1Q09470 495 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 APOBEC3HQ6NTF7 200 aaKnown RBP17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 MS4A14Q96JA4 679 aa17.26■□□□□ 0.35
CHAF1A-201ENST00000301280 ARFGEF1Q9Y6D6 1849 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 RHOBTB3O94955 611 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 ADAM9Q13443 819 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 WDR59Q6PJI9 974 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 RSRC2Q7L4I2 434 aaKnown RBP17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 ANO3Q9BYT9 981 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 CHORDC1Q9UHD1 332 aaPredicted RBP17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 SAR1BQ9Y6B6 198 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 CCDC66A2RUB6 948 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 ZBTB5O15062 677 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 SRGNP10124 158 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 HERVK_113P62684 666 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 GPR161Q8N6U8 529 aaKnown RBP17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 CCSER1Q9C0I3 900 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
CHAF1A-201ENST00000301280 PRPF4BQ13523 1007 aaKnown RBP17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 CYP2J2P51589 502 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 COASYQ13057 564 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 GJB7Q6PEY0 223 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 IL1R1P14778 569 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 JAG1P78504 1218 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 FAM83BQ5T0W9 1011 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 GALNT17Q6IS24 598 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 SECISBP2LQ93073 1101 aaKnown RBP17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 CCDC43Q96MW1 224 aaKnown RBP17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 FUT8Q9BYC5 575 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 CAPN6Q9Y6Q1 641 aa17.24■□□□□ 0.35
CHAF1A-201ENST00000301280 H3BQF6 201 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 CEP112Q8N8E3 955 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 SIPA1L1O43166 1804 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 MED24O75448 989 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 NR2F2P24468 414 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 ARHGAP25P42331 645 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 CASP5P51878 434 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 FAM114A1Q8IWE2 563 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 DHX37Q8IY37 1157 aaKnown RBP17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 RAD54LQ92698 747 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 NDUFB10O96000 172 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 EEF1GP26641 437 aaKnown RBP17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 VWA3BQ502W6 1294 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 KLHL7Q8IXQ5 586 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 COG1Q8WTW3 980 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 CCDC51Q96ER9 411 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 DNAJC18Q9H819 358 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 FAN1Q9Y2M0 1017 aa17.23■□□□□ 0.35
CHAF1A-201ENST00000301280 USO1O60763 962 aaKnown RBP17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 MYL1P05976 194 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 ABCB4P21439 1286 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 SMARCA1P28370 1054 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 KIF11P52732 1056 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 KRT83P78385 493 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 ARHGAP44Q17R89 818 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 ZC2HC1CQ53FD0 456 aaPredicted RBP17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 NLGN1Q8N2Q7 840 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 MYCT1Q8N699 235 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 HAS1Q92839 578 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 DHTKD1Q96HY7 919 aaPredicted RBP17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 PCIF1Q9H4Z3 704 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 TMOD2Q9NZR1 351 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 ARHGAP4P98171 946 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 EHHADHQ08426 723 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 CERS3Q8IU89 383 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
CHAF1A-201ENST00000301280 ERLIN1O75477 346 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 PRPHP41219 470 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 HDAC7Q8WUI4 952 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 RABGGTAQ92696 567 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 TRIM31Q9BZY9 425 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 TMEM39BQ9GZU3 492 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 EMILIN3Q9NT22 766 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 LCMT1Q9UIC8 334 aa17.21■□□□□ 0.35
CHAF1A-201ENST00000301280 ALDH1B1P30837 517 aa17.21■□□□□ 0.34
CHAF1A-201ENST00000301280 KCNB1Q14721 858 aa17.21■□□□□ 0.34
CHAF1A-201ENST00000301280 COBLL1Q53SF7 1204 aa17.21■□□□□ 0.34
CHAF1A-201ENST00000301280 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.34
CHAF1A-201ENST00000301280 SYCP3Q8IZU3 236 aa17.21■□□□□ 0.34
CHAF1A-201ENST00000301280 PACSIN1Q9BY11 444 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms