RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ZC3H4Q9UPT8 1303 aaKnown RBP15.91■□□□□ 0.14
C9orf3-202ENST00000297979 PTPRFP10586 1907 aa15.91■□□□□ 0.14
C9orf3-202ENST00000297979 SSBP05455 408 aaKnown RBP eCLIP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 SPATA31C1P0DKV0 1188 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 HOXA7P31268 230 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 RPS6P62753 249 aaKnown RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 PPP2R5CQ13362 524 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 ARID5BQ14865 1188 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 OTOP1Q7RTM1 612 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 CCDC150Q8NCX0 1101 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 KIAA1524Q8TCG1 905 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 ZNF577Q9BSK1 485 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 POLR3CQ9BUI4 534 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 BMP2KQ9NSY1 1161 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 MYPNQ86TC9 1320 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 A0A1B0GTH6 734 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 GAS7O60861 476 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 IDEP14735 1019 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 PSEN1P49768 467 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 SPAG1Q07617 926 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 GPR162Q16538 588 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 PCNX4Q63HM2 1172 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 SNRNP48Q6IEG0 339 aaKnown RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 SLC30A10Q6XR72 485 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 RNF207Q6ZRF8 634 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 APTXQ7Z2E3 356 aaKnown RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 KIAA0895Q8NCT3 520 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 RIPK3Q9Y572 518 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 TRIM49BA6NDI0 452 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 EML1O00423 815 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 ARP10275 920 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 BCRP11274 1271 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 NF2P35240 595 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 NIPA1Q7RTP0 329 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 IL31RAQ8NI17 732 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 DNAJC19Q96DA6 116 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 CDCA5Q96FF9 252 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 EIF2AK1Q9BQI3 630 aaKnown RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 WDR11Q9BZH6 1224 aa15.9■□□□□ 0.14
C9orf3-202ENST00000297979 ZNF214Q9UL59 606 aaPredicted RBP15.9■□□□□ 0.14
C9orf3-202ENST00000297979 BICDL2A1A5D9 508 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 ATP2A1O14983 1001 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 ITGB5P18084 799 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 PMS1P54277 932 aaKnown RBP15.89■□□□□ 0.13
C9orf3-202ENST00000297979 PSMD2Q13200 908 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 NSMFQ6X4W1 530 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 GPBP1Q86WP2 473 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 SLC39A2Q9NP94 309 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 HOXC10Q9NYD6 342 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 DNM3Q9UQ16 869 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 GLTPD2A6NH11 291 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 CCNE1P24864 410 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 SLC12A3P55017 1021 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 EHHADHQ08426 723 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 NR1I3Q14994 352 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 TMEM132BQ14DG7 1078 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 TTI2Q6NXR4 508 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 KCTD17Q8N5Z5 321 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 P2RX5Q93086 422 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 HPS3Q969F9 1004 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 TRIM47Q96LD4 638 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
C9orf3-202ENST00000297979 SPDYE16A6NNV3 312 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-202ENST00000297979 IPO5O00410 1097 aaKnown RBP15.88■□□□□ 0.13
C9orf3-202ENST00000297979 CYP11B2P19099 503 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 CYP4A11Q02928 519 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 ANKRD20A12PQ8NF67 263 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 TEKT3Q9BXF9 490 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 TUFT1Q9NNX1 390 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 ADD3Q9UEY8 706 aaKnown RBP15.88■□□□□ 0.13
C9orf3-202ENST00000297979 LIMA1Q9UHB6 759 aaKnown RBP15.88■□□□□ 0.13
C9orf3-202ENST00000297979 SCN4AP35499 1836 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 CHMP2AO43633 222 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 COASYQ13057 564 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 FILIP1LQ4L180 1135 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 ARMCX5Q6P1M9 558 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
C9orf3-202ENST00000297979 RIT2Q99578 217 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 TEX13BQ9BXU2 312 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 THAP9Q9H5L6 903 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 PANK4Q9NVE7 773 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 UBIAD1Q9Y5Z9 338 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 LOC285556D6RIA3 1793 aa15.88■□□□□ 0.13
C9orf3-202ENST00000297979 KCNJ18B7U540 433 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 EIF2AK2P19525 551 aaKnown RBP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 SFPQP23246 707 aaKnown RBP eCLIP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 KCNJ12Q14500 433 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 NOLC1Q14978 699 aaKnown RBP eCLIP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 PGM5Q15124 567 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 TKFCQ3LXA3 575 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 TCP11X2Q5H9J9 407 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 CCDC65Q8IXS2 484 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 ANKRD13AQ8IZ07 590 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 C17orf53Q8N3J3 647 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 RMDN3Q96TC7 470 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 ELP3Q9H9T3 547 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 PXMP2Q9NR77 195 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 PSMC6P62333 389 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 MRPS9P82933 396 aaKnown RBP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 CCZ1BP86790 482 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms