RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 ANAPC5Q9UJX4 755 aa16.76■□□□□ 0.27
FNDC1-201ENST00000297267 RASGRF1Q13972 1273 aa16.76■□□□□ 0.27
FNDC1-201ENST00000297267 ZNF746Q6NUN9 644 aaPredicted RBP16.76■□□□□ 0.27
FNDC1-201ENST00000297267 RETREG2Q8NC44 543 aa16.76■□□□□ 0.27
FNDC1-201ENST00000297267 KIF1BO60333 1816 aa16.76■□□□□ 0.27
FNDC1-201ENST00000297267 LCA5Q86VQ0 697 aa16.76■□□□□ 0.27
FNDC1-201ENST00000297267 SYNDIG1LA6NDD5 238 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 PALMO75781 387 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 H2AFZP0C0S5 128 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
FNDC1-201ENST00000297267 H2AFVQ71UI9 128 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 RNF217Q8TC41 542 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 FAM193BQ96PV7 902 aaPredicted RBP16.75■□□□□ 0.27
FNDC1-201ENST00000297267 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 E2F8A0AVK6 867 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 INHBAP08476 426 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 AGR3Q8TD06 166 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 ATP2A3Q93084 1043 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 HEXIM2Q96MH2 286 aaKnown RBP16.75■□□□□ 0.27
FNDC1-201ENST00000297267 TTLL1O95922 423 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 LGSNQ5TDP6 509 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 DEPDC1BQ8WUY9 529 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 GINM1Q9NU53 330 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 P4HA1P13674 534 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 CCDC144BQ3MJ40 725 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 KDELC2Q7Z4H8 507 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 PLA2G4BP0C869 781 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 TUBB2AQ13885 445 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 AFAP1L2Q8N4X5 818 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 TUBB2BQ9BVA1 445 aa16.75■□□□□ 0.27
FNDC1-201ENST00000297267 ZNF185O15231 689 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 PSMC2P35998 433 aaKnown RBP16.74■□□□□ 0.27
FNDC1-201ENST00000297267 PDE1BQ01064 536 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 WHAMMQ8TF30 809 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 ABTB1Q969K4 478 aaPredicted RBP16.74■□□□□ 0.27
FNDC1-201ENST00000297267 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.74■□□□□ 0.27
FNDC1-201ENST00000297267 PEX3P56589 373 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 KRT31Q15323 416 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 HACD3Q9P035 362 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 ZBTB22O15209 634 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 DPP9Q86TI2 863 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 GRK7Q8WTQ7 553 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 COL4A3BPQ9Y5P4 624 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 KIF3CO14782 793 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 GNPTABQ3T906 1256 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 SMYD3Q9H7B4 428 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 SLC38A10Q9HBR0 1119 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 CDC23Q9UJX2 597 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 A0A0G2JLW4 131 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 H0Y3Z8 333 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 ATP2B4P23634 1241 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 SOX11P35716 441 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 NSUN2Q08J23 767 aaKnown RBP eCLIP16.74■□□□□ 0.27
FNDC1-201ENST00000297267 OR6B2Q6IFH4 312 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 DNAAF3Q8N9W5 541 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 FAM71BQ8TC56 605 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 ZCCHC17Q9NP64 241 aaKnown RBP16.74■□□□□ 0.27
FNDC1-201ENST00000297267 SPDYE2BA6NHP3 402 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 PPP6R2O75170 966 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 SPDYE6P0CI01 402 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 LRRC14Q15048 493 aa16.74■□□□□ 0.27
FNDC1-201ENST00000297267 DCPSQ96C86 337 aaKnown RBP16.74■□□□□ 0.27
FNDC1-201ENST00000297267 MFAP3P55082 362 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
FNDC1-201ENST00000297267 CDC27P30260 824 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
FNDC1-201ENST00000297267 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 ATXN7L3BQ96GX2 97 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L15C9J2P7 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L13C9JLJ4 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L11C9JVI0 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L18D6R9N7 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L22D6RA61 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L17D6RBQ6 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L19D6RCP7 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L20D6RJB6 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 SERPINB2P05120 415 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L24Q0WX57 530 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 RINT1Q6NUQ1 792 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 USP17L6PQ6QN14 398 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 MS4A14Q96JA4 679 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 ALG13Q9NP73 1137 aaKnown RBP16.73■□□□□ 0.27
FNDC1-201ENST00000297267 PLAAQ9Y263 795 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 TLR3O15455 904 aaKnown RBP16.73■□□□□ 0.27
FNDC1-201ENST00000297267 RSPH3Q86UC2 560 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 PARD3BQ8TEW8 1205 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 KIF11P52732 1056 aa16.73■□□□□ 0.27
FNDC1-201ENST00000297267 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 CDK8P49336 464 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 DMTNQ08495 405 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 BRDTQ58F21 947 aaPredicted RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 RNF207Q6ZRF8 634 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 TDRD7Q8NHU6 1098 aaKnown RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 SMARCAL1Q9NZC9 954 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 TFR2Q9UP52 801 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 SPAG7O75391 227 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms