RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 RBL2Q08999 1139 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 NOL9Q5SY16 702 aaKnown RBP15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 CSGALNACT2Q8N6G5 542 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 SYTL5Q8TDW5 730 aaPredicted RBP15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 MXRA8Q9BRK3 442 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 AFG3L2Q9Y4W6 797 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 FRMPD4Q14CM0 1322 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 ITIH6Q6UXX5 1313 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 PITPNM2Q9BZ72 1349 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 BICDL2A1A5D9 508 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 GYPCP04921 128 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 MRPS9P82933 396 aaKnown RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 CYP4A11Q02928 519 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 LRRC41Q15345 812 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 DNTTIP2Q5QJE6 756 aaKnown RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 C16orf45Q96MC5 204 aaPredicted RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 AS3MTQ9HBK9 375 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 PICK1Q9NRD5 415 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 PANK4Q9NVE7 773 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 TRMT1Q9NXH9 659 aaKnown RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 PAPPA2Q9BXP8 1791 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 SSBP05455 408 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 RPS6P62753 249 aaKnown RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 GIT2Q14161 759 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 FILIP1LQ4L180 1135 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 LRCH2Q5VUJ6 765 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 MCF2L2Q86YR7 1114 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 CCDC112Q8NEF3 446 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 ERMNQ8TAM6 284 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 NOC3LQ8WTT2 800 aaKnown RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 TAAR1Q96RJ0 339 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 HOMER2Q9NSB8 354 aa15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 MAP3K20Q9NYL2 800 aaKnown RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 WRAP73Q9P2S5 460 aaPredicted RBP15.14■□□□□ 0.01
CHMP4C-201ENST00000297265 C19orf81C9J6K1 198 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 DHX15O43143 795 aaKnown RBP15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 BCRP11274 1271 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 DSG3P32926 999 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 FXR1P51114 621 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 ZCWPW2Q504Y3 356 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 MIIPQ5JXC2 388 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 PURBQ96QR8 312 aaKnown RBP15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 WDR11Q9BZH6 1224 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 BCAS3Q9H6U6 928 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 EHMT1Q9H9B1 1298 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 ADARB2Q9NS39 739 aaKnown RBP15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 RNF181Q9P0P0 153 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 ZNF214Q9UL59 606 aaPredicted RBP15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 DNM3Q9UQ16 869 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 UBIAD1Q9Y5Z9 338 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 STK24Q9Y6E0 443 aa15.13■□□□□ 0.01
CHMP4C-201ENST00000297265 WDR90Q96KV7 1748 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 LGALS16A8MUM7 142 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 ZBTB39O15060 712 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 STX10O60499 249 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 FDX1P10109 184 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 HOXA7P31268 230 aaPredicted RBP15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 CASP14P31944 242 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 RAD51AP2Q09MP3 1159 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 PRKG1Q13976 671 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 CTTNQ14247 550 aaKnown RBP15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 SUPT20HL1Q3ZLR7 823 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 FOXR2Q6PJQ5 311 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 CATSPERGQ6ZRH7 1159 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 LRRC55Q6ZSA7 311 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 CREBRFQ8IUR6 639 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 SAMD3Q8N6K7 520 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 MB21D1Q8N884 522 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 BAG1Q99933 345 aaPredicted RBP15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 TUBGCP2Q9BSJ2 902 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 ZNF577Q9BSK1 485 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 UNC45AQ9H3U1 944 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 KCNH7Q9NS40 1196 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 AKR1B15C9JRZ8 316 aaPredicted RBP15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 IPO5O00410 1097 aaKnown RBP15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 ZBED4O75132 1171 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 SETQ01105 290 aaPredicted RBP15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 FAM26FQ5R3K3 315 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 PCNX4Q63HM2 1172 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 KCTD17Q8N5Z5 321 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 DYDC2Q96IM9 177 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 PANX2Q96RD6 677 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 TUFT1Q9NNX1 390 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 BMP2KQ9NSY1 1161 aaPredicted RBP15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 RABGAP1Q9Y3P9 1069 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 PTPRFP10586 1907 aa15.12■□□□□ 0.01
CHMP4C-201ENST00000297265 ARHGAP6O43182 974 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 MFAP3LO75121 409 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 EYA4O95677 639 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 TNNT1P13805 278 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 FECHP22830 423 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 UBXN1Q04323 297 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms