RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SPC24Q8NBT2 197 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 GIMAP8Q8ND71 665 aaPredicted RBP25.55■■□□□ 1.68
PTX3-201ENST00000295927 MRFAP1L1Q96HT8 127 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 UNC45AQ9H3U1 944 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 CTNND2Q9UQB3 1225 aa25.55■■□□□ 1.68
PTX3-201ENST00000295927 SYNRGQ9UMZ2 1314 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 PRCPP42785 496 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 CYP4A11Q02928 519 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 PABPC4Q13310 644 aaKnown RBP eCLIP25.54■■□□□ 1.68
PTX3-201ENST00000295927 MTMR1Q13613 665 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 XRRA1Q6P2D8 792 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 B3GNT9Q6UX72 402 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 NSUN6Q8TEA1 469 aaKnown RBP25.54■■□□□ 1.68
PTX3-201ENST00000295927 DDX12PQ92771 950 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 PAGR1Q9BTK6 254 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 SPATC1LQ9H0A9 340 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 AGO4Q9HCK5 861 aaKnown RBP25.54■■□□□ 1.68
PTX3-201ENST00000295927 RGL1Q9NZL6 768 aa25.54■■□□□ 1.68
PTX3-201ENST00000295927 SSBP05455 408 aaKnown RBP eCLIP25.53■■□□□ 1.68
PTX3-201ENST00000295927 NR3C2P08235 984 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 CCND2P30279 289 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 CDC25BP30305 580 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 FKBP1BP68106 108 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 UNC13DQ70J99 1090 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 VSIG10LQ86VR7 867 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 HSD17B14Q9BPX1 270 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 GBA2Q9HCG7 927 aaPredicted RBP25.53■■□□□ 1.68
PTX3-201ENST00000295927 PKD2L1Q9P0L9 805 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 MAPK8IP1Q9UQF2 711 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 PVALEFA0A1B0GWK0 134 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 CNMDO75829 334 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 OSBPP22059 807 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 PSMC6P62333 389 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 FANCCQ00597 558 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 SPATA1Q5VX52 437 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 ADSSL1Q8N142 457 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 DNM3Q9UQ16 869 aa25.53■■□□□ 1.68
PTX3-201ENST00000295927 DRC7Q8IY82 874 aa25.52■■□□□ 1.68
PTX3-201ENST00000295927 TUFT1Q9NNX1 390 aa25.52■■□□□ 1.68
PTX3-201ENST00000295927 NMRK2Q9NPI5 230 aa25.52■■□□□ 1.68
PTX3-201ENST00000295927 IFNKQ9P0W0 207 aa25.52■■□□□ 1.68
PTX3-201ENST00000295927 FBXO40Q9UH90 709 aa25.52■■□□□ 1.68
PTX3-201ENST00000295927 RWDD2AQ9UIY3 292 aa25.52■■□□□ 1.68
PTX3-201ENST00000295927 DHX15O43143 795 aaKnown RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 ZNF18P17022 549 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 PAK1Q13153 545 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 ITGB3BPQ13352 177 aaPredicted RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 NELFBQ8WX92 580 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 DNAJC19Q96DA6 116 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 DYDC2Q96IM9 177 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 SAMSN1Q9NSI8 373 aaKnown RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 TESPA1A2RU30 521 aaPredicted RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 DDX39AO00148 427 aaKnown RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 SLITRK3O94933 977 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 SLC12A3P55017 1021 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 STK4Q13043 487 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 HSP90AA4PQ58FG1 418 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 ANKRD35Q8N283 1001 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 GTPBP4Q9BZE4 634 aaKnown RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 XPO4Q9C0E2 1151 aaKnown RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 BMP2KQ9NSY1 1161 aaPredicted RBP25.51■■□□□ 1.67
PTX3-201ENST00000295927 KIAA1217Q5T5P2 1943 aa25.51■■□□□ 1.67
PTX3-201ENST00000295927 CELF2O95319 508 aaKnown RBP25.5■■□□□ 1.67
PTX3-201ENST00000295927 FCER1AP12319 257 aa25.5■■□□□ 1.67
PTX3-201ENST00000295927 CTTNQ14247 550 aaKnown RBP25.5■■□□□ 1.67
PTX3-201ENST00000295927 EPHA7Q15375 998 aa25.5■■□□□ 1.67
PTX3-201ENST00000295927 GPBP1Q86WP2 473 aa25.5■■□□□ 1.67
PTX3-201ENST00000295927 NCAPG2Q86XI2 1143 aa25.5■■□□□ 1.67
PTX3-201ENST00000295927 KCTD17Q8N5Z5 321 aa25.5■■□□□ 1.67
PTX3-201ENST00000295927 C2orf69Q8N8R5 385 aa25.5■■□□□ 1.67
PTX3-201ENST00000295927 MOV10L1Q9BXT6 1211 aaKnown RBP25.5■■□□□ 1.67
PTX3-201ENST00000295927 RBPJLQ9UBG7 517 aa25.5■■□□□ 1.67
PTX3-201ENST00000295927 COBLO75128 1261 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 IDEP14735 1019 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 STIM1Q13586 685 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 HPS3Q969F9 1004 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 TXNRD2Q9NNW7 524 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 PFASO15067 1338 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 CYP11B2P19099 503 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 TPH2Q8IWU9 490 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 SYT2Q8N9I0 419 aaPredicted RBP25.49■■□□□ 1.67
PTX3-201ENST00000295927 TBC1D22BQ9NU19 505 aa25.49■■□□□ 1.67
PTX3-201ENST00000295927 GOLGA6L6A8MZA4 724 aa25.48■■□□□ 1.67
PTX3-201ENST00000295927 SERPINC1P01008 464 aa25.48■■□□□ 1.67
PTX3-201ENST00000295927 GPRASP2Q96D09 838 aa25.48■■□□□ 1.67
PTX3-201ENST00000295927 ATP9AO75110 1047 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 CDK11BP21127 795 aaKnown RBP25.47■■□□□ 1.67
PTX3-201ENST00000295927 MUTP22033 750 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 CNTN2Q02246 1040 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 EHHADHQ08426 723 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 ARSHQ5FYA8 562 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 MIER3Q7Z3K6 550 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 NLRX1Q86UT6 975 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 KIAA0895Q8NCT3 520 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 ZNF526Q8TF50 670 aaPredicted RBP25.47■■□□□ 1.67
PTX3-201ENST00000295927 INPP4AQ96PE3 977 aaPredicted RBP25.47■■□□□ 1.67
PTX3-201ENST00000295927 NPHP3-ACAD11A0A0J9YXS1 232 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 PSMA7O14818 248 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 EYA4O95677 639 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 SLC25A27O95847 323 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms