RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 ADGRA3Q8IWK6 1321 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 FOXP2O15409 715 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 LINC00271P0C7V0 271 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 TGFB3P10600 412 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
USP41-201ENST00000292729 GNAT1P11488 350 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 NDUFV1P49821 464 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 COASYQ13057 564 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 ALX1Q15699 326 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 CDC37Q16543 378 aaPredicted RBP12.17□□□□□ -0.46
USP41-201ENST00000292729 HSDL1Q3SXM5 330 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 NAALADL2Q58DX5 795 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 CELF3Q5SZQ8 465 aaKnown RBP12.17□□□□□ -0.46
USP41-201ENST00000292729 TSHZ3Q63HK5 1081 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 TBC1D5Q92609 795 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 ATOH1Q92858 354 aaPredicted RBP12.17□□□□□ -0.46
USP41-201ENST00000292729 P2RX5Q93086 422 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 SPATA33Q96N06 139 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 C16orf70Q9BSU1 422 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
USP41-201ENST00000292729 MRPL11Q9Y3B7 192 aaKnown RBP12.17□□□□□ -0.46
USP41-201ENST00000292729 KIAA1671Q9BY89 1806 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 SPTBN4Q9H254 2564 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 PROB1E7EW31 1015 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 H3BRB1 525 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 TREHO43280 583 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 PCP11498 1178 aaKnown RBP12.16□□□□□ -0.46
USP41-201ENST00000292729 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
USP41-201ENST00000292729 AVPR2P30518 371 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 RRP12Q5JTH9 1297 aaKnown RBP12.16□□□□□ -0.46
USP41-201ENST00000292729 FAM26DQ5JW98 314 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 ERMP1Q7Z2K6 904 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 EFHBQ8N7U6 833 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 SMRP1Q8NCR6 262 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
USP41-201ENST00000292729 DCTPP1Q9H773 170 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 ALG13Q9NP73 1137 aaKnown RBP12.16□□□□□ -0.46
USP41-201ENST00000292729 FAM86C1Q9NVL1 165 aa12.16□□□□□ -0.46
USP41-201ENST00000292729 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
USP41-201ENST00000292729 PTPRZ1P23471 2315 aaPredicted RBP12.16□□□□□ -0.46
USP41-201ENST00000292729 ZFHX2Q9C0A1 2572 aaPredicted RBP12.15□□□□□ -0.46
USP41-201ENST00000292729 LINC01565O15544 149 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 GGPS1O95749 300 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 CTSHP09668 335 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 SMIM10L2AP0DMW4 78 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 SMIM10L2BP0DMW5 78 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.46
USP41-201ENST00000292729 NT5C2P49902 561 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 RRP1P56182 461 aaKnown RBP12.15□□□□□ -0.46
USP41-201ENST00000292729 SAMD3Q8N6K7 520 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 ZNF689Q96CS4 500 aaPredicted RBP12.15□□□□□ -0.46
USP41-201ENST00000292729 PHF7Q9BWX1 381 aaPredicted RBP12.15□□□□□ -0.46
USP41-201ENST00000292729 RNPEPQ9H4A4 650 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 RC3H2Q9HBD1 1191 aaKnown RBP12.15□□□□□ -0.46
USP41-201ENST00000292729 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
USP41-201ENST00000292729 CCDC171Q6TFL3 1326 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 FSD2A1L4K1 749 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 ATF7P17544 494 aaPredicted RBP12.14□□□□□ -0.47
USP41-201ENST00000292729 HNRNPUQ00839 825 aaKnown RBP eCLIP12.14□□□□□ -0.47
USP41-201ENST00000292729 GHRHRQ02643 423 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
USP41-201ENST00000292729 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 DGKHQ86XP1 1220 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 ADGRF4Q8IZF3 695 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 PI4K2BQ8TCG2 481 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 ASIC4Q96FT7 647 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 USP26Q9BXU7 913 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 UBA5Q9GZZ9 404 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 CLEC1BQ9P126 229 aa12.14□□□□□ -0.47
USP41-201ENST00000292729 ZMYM6O95789 1325 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 RGS20O76081 388 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 CFBP00751 764 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 FGAP02671 866 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 LGALS2P05162 132 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
USP41-201ENST00000292729 UBA1P22314 1058 aaKnown RBP12.13□□□□□ -0.47
USP41-201ENST00000292729 ICAM3P32942 547 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 HSD17B4P51659 736 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 VCPP55072 806 aaKnown RBP12.13□□□□□ -0.47
USP41-201ENST00000292729 CAMK1Q14012 370 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 CCDC178Q5BJE1 867 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 VSIG10LQ86VR7 867 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 OSBPL7Q9BZF2 842 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 USP15Q9Y4E8 981 aaPredicted RBP12.13□□□□□ -0.47
USP41-201ENST00000292729 FAM186AA6NE01 2351 aa12.13□□□□□ -0.47
USP41-201ENST00000292729 DOCK5Q9H7D0 1870 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 PLXNA4Q9HCM2 1894 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
USP41-201ENST00000292729 ENPP3O14638 875 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 DGKIO75912 1065 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 PGM5Q15124 567 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 PTPN21Q16825 1174 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 ASPRV1Q53RT3 343 aa12.12□□□□□ -0.47
USP41-201ENST00000292729 STOX1Q6ZVD7 989 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms