RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TRIM28Q13263 835 aaKnown RBP13.88□□□□□ -0.19
PTCD1-201ENST00000292478 HLFQ16534 295 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 CCDC38Q502W7 563 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
PTCD1-201ENST00000292478 TBC1D10CQ8IV04 446 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 GSDMBQ8TAX9 411 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 PLEKHA8P1O95397 391 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 RNASELQ05823 741 aaKnown RBP13.88□□□□□ -0.19
PTCD1-201ENST00000292478 PRPSAP1Q14558 356 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 KIF22Q14807 665 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 KRT31Q15323 416 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 SH2D4BQ5SQS7 431 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 PHLDB3Q6NSJ2 640 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 ARMC9Q7Z3E5 817 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 WHAMMQ8TF30 809 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 USP42Q9H9J4 1324 aaKnown RBP13.88□□□□□ -0.19
PTCD1-201ENST00000292478 PVALEFA0A1B0GWK0 134 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 ENC1O14682 589 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 ECEL1O95672 775 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 SLMAPQ14BN4 828 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 DIXDC1Q155Q3 683 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 ALS2CLQ60I27 953 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 LCMT1Q9UIC8 334 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 RIPOR2Q9Y4F9 1068 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 CYP2D7A0A087X1C5 515 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 SOWAHDA6NJG2 315 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 FAM133AQ8N9E0 248 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 NUF2Q9BZD4 464 aa13.88□□□□□ -0.19
PTCD1-201ENST00000292478 IPO11Q9UI26 975 aaKnown RBP13.88□□□□□ -0.19
PTCD1-201ENST00000292478 ABCA6Q8N139 1617 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 CASQ2O14958 399 aaPredicted RBP13.87□□□□□ -0.19
PTCD1-201ENST00000292478 MXI1P50539 228 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 LRRC8CQ8TDW0 803 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 AIFM3Q96NN9 605 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 H7C0C1 242 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 ATP5OP48047 213 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 ATP1A2P50993 1020 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 JAK3P52333 1124 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 BSPRYQ5W0U4 402 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 SLFN12LQ6IEE8 588 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 CNOT10Q9H9A5 744 aaKnown RBP13.87□□□□□ -0.19
PTCD1-201ENST00000292478 EPB41L5Q9HCM4 733 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.87□□□□□ -0.19
PTCD1-201ENST00000292478 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 NEDD4P46934 1319 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 VPS41P49754 854 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 RHOT2Q8IXI1 618 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 ACRBPQ8NEB7 543 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 TTLL3Q9Y4R7 772 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 GOLGA8QA0A0J9YX86 632 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 GOLGA8OA6NCC3 632 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 GOLGA8CPA6NN73 597 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 GOLGA8NF8WBI6 632 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 ZBTB5O15062 677 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 COBLO75128 1261 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 SUN1O94901 812 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 CLNS1AP54105 237 aaKnown RBP13.87□□□□□ -0.19
PTCD1-201ENST00000292478 RFX6Q8HWS3 928 aa13.87□□□□□ -0.19
PTCD1-201ENST00000292478 CLIC2O15247 247 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 EVI5O60447 810 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 DDIT3P35638 169 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 GRM4Q14833 912 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 GLE1Q53GS7 698 aaKnown RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 SGO2Q562F6 1265 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 LY9Q9HBG7 655 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 COL15A1P39059 1388 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 CAPN7Q9Y6W3 813 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 ARHGEF37A1IGU5 675 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 SLC8A1P32418 973 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 EIF3BP55884 814 aaKnown RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 GOLGA8FQ08AF8 430 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 GOLGA8DPQ0D2H9 430 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 UBE2SQ16763 222 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 ADAT2Q7Z6V5 191 aaKnown RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 FAM193BQ96PV7 902 aaPredicted RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 UBE2TQ9NPD8 197 aaPredicted RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 INTS9Q9NV88 658 aaKnown RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 BAIAP2L1Q9UHR4 511 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 AFG3L2Q9Y4W6 797 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 PNPLA7Q6ZV29 1317 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 ZNF233A6NK53 670 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 GFPT2O94808 682 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 LDHAP00338 332 aaKnown RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 SRGAP2BP0DMP2 458 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 UBXN2AP68543 259 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 SGMS1Q86VZ5 419 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 SH3RF3Q8TEJ3 882 aaPredicted RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 RPS6KC1Q96S38 1066 aa13.86□□□□□ -0.19
PTCD1-201ENST00000292478 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
PTCD1-201ENST00000292478 MOCS3O95396 460 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 ARHGAP4P98171 946 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms