RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 A6NJR5 290 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 MEIS2O14770 477 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
CCDC58-201ENST00000291458 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 MRPS9P82933 396 aaKnown RBP11.23□□□□□ -0.61
CCDC58-201ENST00000291458 SP2Q02086 613 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC58-201ENST00000291458 LRIT3Q3SXY7 679 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 TSGA10IPQ3SY00 556 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 MFSD5Q6N075 450 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 DEFB128Q7Z7B8 93 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 VSIG10LQ86VR7 867 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 TMEM199Q8N511 208 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 SLC43A3Q8NBI5 491 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC58-201ENST00000291458 BCAS3Q9H6U6 928 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 MLXIPQ9HAP2 919 aa11.23□□□□□ -0.61
CCDC58-201ENST00000291458 NCOA5Q9HCD5 579 aaKnown RBP11.23□□□□□ -0.61
CCDC58-201ENST00000291458 DNAH12Q6ZR08 3092 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 SPDYE3A6NKU9 549 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 NOP56O00567 594 aaKnown RBP11.22□□□□□ -0.61
CCDC58-201ENST00000291458 PSMA5P28066 241 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
CCDC58-201ENST00000291458 PSEN2P49810 448 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 ADCY7P51828 1080 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 CCT2P78371 535 aaKnown RBP11.22□□□□□ -0.61
CCDC58-201ENST00000291458 STK3Q13188 491 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 NBR1Q14596 966 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 FRMPD4Q14CM0 1322 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 DGKDQ16760 1214 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 CELF3Q5SZQ8 465 aaKnown RBP11.22□□□□□ -0.61
CCDC58-201ENST00000291458 FAM109BQ6ICB4 259 aaPredicted RBP11.22□□□□□ -0.61
CCDC58-201ENST00000291458 CYFIP1Q7L576 1253 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 TRIM50Q86XT4 487 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 PPTC7Q8NI37 304 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 PHKBQ93100 1093 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 MAF1Q9H063 256 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 WNT8AQ9H1J5 351 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 TMEM260Q9NX78 707 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 MAP3K20Q9NYL2 800 aaKnown RBP11.22□□□□□ -0.61
CCDC58-201ENST00000291458 TELO2Q9Y4R8 837 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
CCDC58-201ENST00000291458 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
CCDC58-201ENST00000291458 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 STXBP3O00186 592 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 KPNA6O60684 536 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 DTNBO60941 627 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 SMARCA1P28370 1054 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 FUT2Q10981 343 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 SEMA3FQ13275 785 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 PTGISQ16647 500 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 KIAA0753Q2KHM9 967 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 HSDL1Q3SXM5 330 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 GNPTABQ3T906 1256 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 UTP14CQ5TAP6 766 aaKnown RBP11.21□□□□□ -0.61
CCDC58-201ENST00000291458 GDF6Q6KF10 455 aaPredicted RBP11.21□□□□□ -0.61
CCDC58-201ENST00000291458 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 ZNF365Q70YC5 407 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 OTOP2Q7RTS6 562 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 KAT2BQ92831 832 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 KCNB2Q92953 911 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 FAM217BQ9NTX9 383 aaPredicted RBP11.21□□□□□ -0.61
CCDC58-201ENST00000291458 PCDHA6Q9UN73 950 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 PCDHA8Q9Y5H6 950 aa11.21□□□□□ -0.61
CCDC58-201ENST00000291458 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 GRXCR1A8MXD5 290 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 PIK3CDO00329 1044 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 FIBPO43427 364 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 ZNF200P98182 395 aaPredicted RBP11.2□□□□□ -0.62
CCDC58-201ENST00000291458 TMEM240Q5SV17 173 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 ZNF697Q5TEC3 545 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 MYSM1Q5VVJ2 828 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 JAKMIP3Q5VZ66 844 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 PCNX4Q63HM2 1172 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 NFRKBQ6P4R8 1299 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 PSRC1Q6PGN9 363 aaPredicted RBP11.2□□□□□ -0.62
CCDC58-201ENST00000291458 NLRX1Q86UT6 975 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 C7orf31Q8N865 590 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 INPP4AQ96PE3 977 aaPredicted RBP11.2□□□□□ -0.62
CCDC58-201ENST00000291458 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 USP26Q9BXU7 913 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 ANO3Q9BYT9 981 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 EHMT1Q9H9B1 1298 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 IL23AQ9NPF7 189 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 HDAC6Q9UBN7 1215 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 CYP46A1Q9Y6A2 500 aa11.2□□□□□ -0.62
CCDC58-201ENST00000291458 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 LGALS2P05162 132 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 SUPT20HL2P0C7V6 817 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 SCG2P13521 617 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
CCDC58-201ENST00000291458 TOB2Q14106 344 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 611.9 ms