RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 VAV3Q9UKW4 847 aa21.42■■□□□ 1.02
BRAF-201ENST00000288602 TFR2Q9UP52 801 aa21.42■■□□□ 1.02
BRAF-201ENST00000288602 IGLV3-22A0A075B6J6 115 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 TBX3O15119 743 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 CHMP2AO43633 222 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 MCTP2Q6DN12 878 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 CCDC155Q8N6L0 562 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 FEZ1Q99689 392 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 VPS33BQ9H267 617 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 PCDHA2Q9Y5H9 948 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 GCOM1H8Y6P7 765 aaPredicted RBP21.41■■□□□ 1.02
BRAF-201ENST00000288602 NFKBIEO00221 500 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 INPP5BP32019 993 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 LRRC63Q05C16 580 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 VWA3BQ502W6 1294 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 CCDC65Q8IXS2 484 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 AGBL1Q96MI9 1066 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 NDST4Q9H3R1 872 aa21.41■■□□□ 1.02
BRAF-201ENST00000288602 RPA1P27694 616 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 ARHGAP29Q52LW3 1261 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 ZNF569Q5MCW4 686 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 SAMD7Q7Z3H4 446 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 FAM20AQ96MK3 541 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 TRIM10Q9UDY6 481 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 DNM3Q9UQ16 869 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 EPN1Q9Y6I3 576 aaPredicted RBP21.4■■□□□ 1.02
BRAF-201ENST00000288602 TRAF5O00463 557 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 EPHB6O15197 1021 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 FKBP15Q5T1M5 1219 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 LDHDQ86WU2 507 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 ERMNQ8TAM6 284 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 FAM207AQ9NSI2 230 aaPredicted RBP21.4■■□□□ 1.02
BRAF-201ENST00000288602 REXO2Q9Y3B8 237 aaKnown RBP21.4■■□□□ 1.02
BRAF-201ENST00000288602 SRCAPQ6ZRS2 3230 aa21.4■■□□□ 1.02
BRAF-201ENST00000288602 NDUFA10O95299 355 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 ASNSP08243 561 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 CYP3A4P08684 503 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 CASP5P51878 434 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 TGFB2P61812 414 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 SCFD1Q8WVM8 642 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 TSG101Q99816 390 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 EIF2AK1Q9BQI3 630 aaKnown RBP21.39■■□□□ 1.02
BRAF-201ENST00000288602 KIF13BQ9NQT8 1826 aa21.39■■□□□ 1.02
BRAF-201ENST00000288602 PHF20L1A8MW92 1017 aa21.39■■□□□ 1.01
BRAF-201ENST00000288602 CTTNQ14247 550 aaKnown RBP21.39■■□□□ 1.01
BRAF-201ENST00000288602 PIGOQ8TEQ8 1089 aa21.39■■□□□ 1.01
BRAF-201ENST00000288602 BHMT2Q9H2M3 363 aa21.39■■□□□ 1.01
BRAF-201ENST00000288602 BCS1LQ9Y276 419 aa21.39■■□□□ 1.01
BRAF-201ENST00000288602 ZBTB39O15060 712 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 KIF5CO60282 957 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 MAP3K9P80192 1104 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 GIT2Q14161 759 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 TSR1Q2NL82 804 aaKnown RBP21.38■■□□□ 1.01
BRAF-201ENST00000288602 KIF4BQ2VIQ3 1234 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 ZCWPW2Q504Y3 356 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 ERGIC2Q96RQ1 377 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 REEP2Q9BRK0 252 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 RSPH10B2B2RC85 870 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 RSPH10BP0C881 870 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 ARHGAP25P42331 645 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 TBC1D10BQ4KMP7 808 aaPredicted RBP21.38■■□□□ 1.01
BRAF-201ENST00000288602 MNS1Q8NEH6 495 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 TANGO6Q9C0B7 1094 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 EMILIN3Q9NT22 766 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 FEM1BQ9UK73 627 aa21.38■■□□□ 1.01
BRAF-201ENST00000288602 MAN2A1Q16706 1144 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 SYT2Q8N9I0 419 aaPredicted RBP21.37■■□□□ 1.01
BRAF-201ENST00000288602 TEPSINQ96N21 525 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 SH2D4AQ9H788 454 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 MMRN2Q9H8L6 949 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 MRPL11Q9Y3B7 192 aaKnown RBP21.37■■□□□ 1.01
BRAF-201ENST00000288602 MRFAP1Q9Y605 127 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 GJA3Q9Y6H8 435 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 RASSF7Q02833 373 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 LRCH2Q5VUJ6 765 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 FBXO38Q6PIJ6 1188 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 CPXCR1Q8N123 301 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 SLC35F6Q8N357 371 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 NUP58Q9BVL2 599 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 EPC1Q9H2F5 836 aa21.37■■□□□ 1.01
BRAF-201ENST00000288602 SFI1A8K8P3 1242 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 FGFR1OPO95684 399 aaKnown RBP21.36■■□□□ 1.01
BRAF-201ENST00000288602 FKBP3Q00688 224 aaKnown RBP21.36■■□□□ 1.01
BRAF-201ENST00000288602 MAP3K10Q02779 954 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 OTOP1Q7RTM1 612 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 FAM160B2Q86V87 743 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 TPH2Q8IWU9 490 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 SMCR8Q8TEV9 937 aaPredicted RBP21.36■■□□□ 1.01
BRAF-201ENST00000288602 RUSC1Q9BVN2 902 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 SIK3Q9Y2K2 1263 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 ABCB11O95342 1321 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 SPDYE4A6NLX3 237 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 ARP10275 920 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 ZBED6P86452 979 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 CCDC40Q4G0X9 1142 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 SFR1Q86XK3 245 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 KCTD10Q9H3F6 313 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 HOMER2Q9NSB8 354 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 CGNQ9P2M7 1197 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms