RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 OTOP1Q7RTM1 612 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 FAM114A1Q8IWE2 563 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 REPS2Q8NFH8 660 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 EIF2AK1Q9BQI3 630 aaKnown RBP11.34□□□□□ -0.59
C9orf43-201ENST00000288462 TUFT1Q9NNX1 390 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 ADARB2Q9NS39 739 aaKnown RBP11.34□□□□□ -0.59
C9orf43-201ENST00000288462 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
C9orf43-201ENST00000288462 PANK4Q9NVE7 773 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 FZD1Q9UP38 647 aa11.34□□□□□ -0.59
C9orf43-201ENST00000288462 MUTP22033 750 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 ARSHQ5FYA8 562 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 FAM26FQ5R3K3 315 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 KRT26Q7Z3Y9 468 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 SYT2Q8N9I0 419 aaPredicted RBP11.33□□□□□ -0.6
C9orf43-201ENST00000288462 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
C9orf43-201ENST00000288462 ATG4CQ96DT6 458 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 PANX2Q96RD6 677 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 MXRA8Q9BRK3 442 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 WDR11Q9BZH6 1224 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 VPS16Q9H269 839 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 ADAMTS5Q9UNA0 930 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 LCTP09848 1927 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 MFAP3LO75121 409 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 DDNO94850 711 aaPredicted RBP11.33□□□□□ -0.6
C9orf43-201ENST00000288462 SSBP05455 408 aaKnown RBP eCLIP11.33□□□□□ -0.6
C9orf43-201ENST00000288462 FECHP22830 423 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 OAZ1P54368 228 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 HMGCS2P54868 508 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 PSMC6P62333 389 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 ZCWPW2Q504Y3 356 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 PCNX4Q63HM2 1172 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 ZNF507Q8TCN5 953 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
C9orf43-201ENST00000288462 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 C16orf45Q96MC5 204 aaPredicted RBP11.33□□□□□ -0.6
C9orf43-201ENST00000288462 RIT2Q99578 217 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 HSD17B14Q9BPX1 270 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 MAGEC2Q9UBF1 373 aaPredicted RBP11.33□□□□□ -0.6
C9orf43-201ENST00000288462 DNM3Q9UQ16 869 aa11.33□□□□□ -0.6
C9orf43-201ENST00000288462 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 STX10O60499 249 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 GAS7O60861 476 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 EYA4O95677 639 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 GYPCP04921 128 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 ARP10275 920 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 ITGB5P18084 799 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 TRIM14Q14142 442 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 SLC30A10Q6XR72 485 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 GLIS3Q8NEA6 775 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 WNK4Q96J92 1243 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 PPP1R13BQ96KQ4 1090 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 BAG1Q99933 345 aaPredicted RBP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 ZNF577Q9BSK1 485 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 AFG3L2Q9Y4W6 797 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 DSG3P32926 999 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 CYP4A11Q02928 519 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 RBL2Q08999 1139 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 LRRC55Q6ZSA7 311 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 MB21D1Q8N884 522 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 TRERF1Q96PN7 1200 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 TEKT3Q9BXF9 490 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 UNC45AQ9H3U1 944 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
C9orf43-201ENST00000288462 SNCAIPQ9Y6H5 919 aa11.32□□□□□ -0.6
C9orf43-201ENST00000288462 IPO5O00410 1097 aaKnown RBP11.31□□□□□ -0.6
C9orf43-201ENST00000288462 ATP2A1O14983 1001 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 CCP110O43303 1012 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
C9orf43-201ENST00000288462 MRPS9P82933 396 aaKnown RBP11.31□□□□□ -0.6
C9orf43-201ENST00000288462 GIT2Q14161 759 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 NEK9Q8TD19 979 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 SYT17Q9BSW7 474 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 FGFBP2Q9BYJ0 223 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 RNF146Q9NTX7 359 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms