RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 BRCA2P51587 3418 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 POTEMA6NI47 508 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 ADCY6O43306 1168 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 ADCY3O60266 1144 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 UBA1P22314 1058 aaKnown RBP24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 CDC25AP30304 524 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 ADCYAP1R1P41586 468 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 FXR2P51116 673 aaKnown RBP eCLIP24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 TPRNQ4KMQ1 711 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 ADALQ6DHV7 355 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 SHC4Q6S5L8 630 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 USP49Q70CQ1 688 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 TRPV1Q8NER1 839 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 RIT2Q99578 217 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 ZHX1Q9UKY1 873 aaPredicted RBP24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 LBX1P52954 281 aa24.61■■□□□ 1.53
PDLIM3-203ENST00000284771 CCDC144BQ3MJ40 725 aa24.61■■□□□ 1.53
PDLIM3-203ENST00000284771 RAET1EQ8TD07 263 aa24.61■■□□□ 1.53
PDLIM3-203ENST00000284771 SCFD2Q8WU76 684 aa24.61■■□□□ 1.53
PDLIM3-203ENST00000284771 SENP7Q9BQF6 1050 aa24.61■■□□□ 1.53
PDLIM3-203ENST00000284771 PP2D1A8MPX8 630 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 DDX39AO00148 427 aaKnown RBP24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 SORBS3O60504 671 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 GAS7O60861 476 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 CUTAO60888 179 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 TXNP10599 105 aaKnown RBP24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 GJC2Q5T442 439 aaPredicted RBP24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 PXYLP1Q8TE99 480 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 COPS5Q92905 334 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 TBC1D22BQ9NU19 505 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 PTCH2Q9Y6C5 1203 aa24.6■■□□□ 1.53
PDLIM3-203ENST00000284771 POTEFA5A3E0 1075 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 PRMT2P55345 433 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 CACNB2Q08289 660 aaPredicted RBP24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 PDIA5Q14554 519 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 ZNF579Q8NAF0 562 aaKnown RBP24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 EPSTI1Q96J88 318 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 EML1O00423 815 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 CCNE2O96020 404 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 CYBAP13498 195 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 SMPD1P17405 629 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 PPP2R5CQ13362 524 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 TTLL4Q14679 1199 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 CSPP1Q1MSJ5 1256 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 KCNV1Q6PIU1 500 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 CYFIP1Q7L576 1253 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 UNC45AQ9H3U1 944 aa24.59■■□□□ 1.53
PDLIM3-203ENST00000284771 NFASCO94856 1347 aa24.58■■□□□ 1.53
PDLIM3-203ENST00000284771 LONP1P36776 959 aaKnown RBP24.58■■□□□ 1.53
PDLIM3-203ENST00000284771 MFSD14CQ5VZR4 134 aa24.58■■□□□ 1.53
PDLIM3-203ENST00000284771 TRMT44Q8IYL2 757 aaKnown RBP24.58■■□□□ 1.53
PDLIM3-203ENST00000284771 TEKT3Q9BXF9 490 aa24.58■■□□□ 1.53
PDLIM3-203ENST00000284771 PTPN22Q9Y2R2 807 aa24.58■■□□□ 1.53
PDLIM3-203ENST00000284771 FARP2O94887 1054 aaPredicted RBP24.57■■□□□ 1.52
PDLIM3-203ENST00000284771 MMTAG2Q9BU76 263 aaKnown RBP24.57■■□□□ 1.52
PDLIM3-203ENST00000284771 LRWD1Q9UFC0 647 aa24.57■■□□□ 1.52
PDLIM3-203ENST00000284771 CHMP2AO43633 222 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 GGPS1O95749 300 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 HMGCRP04035 888 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 CTCFP49711 727 aaPredicted RBP24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 NEDD9Q14511 834 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 TMEM266Q2M3C6 531 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 DUSP28Q4G0W2 176 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 CELF3Q5SZQ8 465 aaKnown RBP24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 MAP3K21Q5TCX8 1036 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 RESP18Q5W5W9 173 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 IQSEC1Q6DN90 963 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 SYMPKQ92797 1274 aaKnown RBP24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 SDF4Q9BRK5 362 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 A0A1W2PQ27 194 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 A0A1W2PQ64 194 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 A0A1W2PQD8 194 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 CMA1P23946 247 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 NFKBIBQ15653 356 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 LENG1Q96BZ8 264 aaPredicted RBP24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 GOLPH3LQ9H4A5 285 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 JPH1Q9HDC5 661 aaPredicted RBP24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 SLC9A2Q9UBY0 812 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 NRBP1Q9UHY1 535 aa24.56■■□□□ 1.52
PDLIM3-203ENST00000284771 A0A1B0GVL5 298 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 GOLGA6L22H0YM25 854 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 PRKAR2AP13861 404 aaKnown RBP24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 GRK4P32298 578 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 UBE2HP62256 183 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 TNFAIP2Q03169 654 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 NCAPH2Q6IBW4 605 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 METTL7BQ6UX53 244 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 AK8Q96MA6 479 aa24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 GNEQ9Y223 722 aaKnown RBP24.55■■□□□ 1.52
PDLIM3-203ENST00000284771 CCND3P30281 292 aaPredicted RBP24.54■■□□□ 1.52
PDLIM3-203ENST00000284771 SP4Q02446 784 aa24.54■■□□□ 1.52
PDLIM3-203ENST00000284771 ARHGAP1Q07960 439 aa24.54■■□□□ 1.52
PDLIM3-203ENST00000284771 HSDL1Q3SXM5 330 aa24.54■■□□□ 1.52
PDLIM3-203ENST00000284771 SLAIN1Q8ND83 568 aa24.54■■□□□ 1.52
PDLIM3-203ENST00000284771 GOLGA6L4A6NEF3 574 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 GIMAP8Q8ND71 665 aaPredicted RBP24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 RAB34Q9BZG1 259 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 MLXIPQ9HAP2 919 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 A0A087X0B3 334 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 ACTR2P61160 394 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms