RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 SPC25Q9HBM1 224 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 YARSP54577 528 aaKnown RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 ITKQ08881 620 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 GOLGA8QA0A0J9YX86 632 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 GOLGA8OA6NCC3 632 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 GOLGA8NF8WBI6 632 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 KCNQ3O43525 872 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 MMP1P03956 469 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 HSPA6P17066 643 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 HNRNPH1P31943 449 aaKnown RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 ALKBH5Q6P6C2 394 aaKnown RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 ARHGAP18Q8N392 663 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 OSBPL9Q96SU4 736 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 GDAQ9Y2T3 454 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 ATP1A1P05023 1023 aaKnown RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 CCNE1P24864 410 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 LIG4P49917 911 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 MFAP3P55082 362 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 CD248Q9HCU0 757 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 SAYSD1Q9NPB0 183 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 NDE1Q9NXR1 346 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 M0R2C6 588 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 ACTN1P12814 892 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 ZFXP17010 805 aaPredicted RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 FOXD4Q12950 439 aaPredicted RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 PCGF5Q86SE9 256 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 PYROXD1Q8WU10 500 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 OLFM3Q96PB7 478 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 NBPF3Q9H094 633 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 UFL1O94874 794 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 PMS2P54278 862 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 NSMFQ6X4W1 530 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 CRLF3Q8IUI8 442 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 DTX3LQ8TDB6 740 aa17.06■□□□□ 0.32
MSI2-201ENST00000284073 THRAP3Q9Y2W1 955 aaKnown RBP17.06■□□□□ 0.32
MSI2-201ENST00000284073 CNGA1P29973 690 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 DEUP1Q05D60 604 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 CCDC117Q8IWD4 279 aaPredicted RBP17.05■□□□□ 0.32
MSI2-201ENST00000284073 FAM186BQ8IYM0 893 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
MSI2-201ENST00000284073 SORBS3O60504 671 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 AP2B1P63010 937 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 GFPT1Q06210 699 aaPredicted RBP17.05■□□□□ 0.32
MSI2-201ENST00000284073 TCP10Q12799 353 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 ATG16L1Q676U5 607 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 TRPV6Q9H1D0 765 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 SRPRBQ9Y5M8 271 aaKnown RBP17.05■□□□□ 0.32
MSI2-201ENST00000284073 TRAPPC8Q9Y2L5 1435 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 CCDC188H7C350 402 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 STXBP3O00186 592 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 PPP1R37O75864 691 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 OLFML2BQ68BL8 750 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 CCT8L2Q96SF2 557 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 DDX47Q9H0S4 455 aaKnown RBP17.05■□□□□ 0.32
MSI2-201ENST00000284073 TEX33O43247 280 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 EPN3Q9H201 632 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 MAGEF1Q9HAY2 307 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 CFAP69A5D8W1 941 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 TRIM49BA6NDI0 452 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 GSTA4O15217 222 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 KDM1AO60341 852 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 CUL3Q13618 768 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
MSI2-201ENST00000284073 TMEM154Q6P9G4 183 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 KIAA2013Q8IYS2 634 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 POLR3CQ9BUI4 534 aaPredicted RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 EIF3HO15372 352 aaKnown RBP eCLIP17.04■□□□□ 0.32
MSI2-201ENST00000284073 BRAFP15056 766 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 YWHAEP62258 255 aaKnown RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 CUEDC2Q9H467 287 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 UBE2TQ9NPD8 197 aaPredicted RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 PSMC2P35998 433 aaKnown RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 SESTD1Q86VW0 696 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 LRRC47Q8N1G4 583 aaKnown RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 NT5C1BQ96P26 610 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 PAIP2BQ9ULR5 123 aaKnown RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 ABCC12Q96J65 1359 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 GOLGA8SH3BPF8 625 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 PIK3CAP42336 1068 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 IP6K1Q92551 441 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 USP6NLQ92738 828 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 UPF3AQ9H1J1 476 aaKnown RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 ARHGAP10A1A4S6 786 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 PMS1P54277 932 aaKnown RBP17.04■□□□□ 0.32
MSI2-201ENST00000284073 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 SLC26A7Q8TE54 656 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 RAPGEF5Q92565 580 aa17.04■□□□□ 0.32
MSI2-201ENST00000284073 MDH1P40925 334 aaKnown RBP17.03■□□□□ 0.32
MSI2-201ENST00000284073 XKR9Q5GH70 373 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms