RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ZMYND10O75800 440 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 CCNE1P24864 410 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 BASP1P80723 227 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ARHGEF16Q5VV41 709 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 DCLK2Q8N568 766 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 DNAAF3Q8N9W5 541 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 CATSPER1Q8NEC5 780 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ZFP69BQ9UJL9 534 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 hCG_1642624A0A1W2PR95 340 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 SYCE1LA8MT33 242 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 APOA1P02647 267 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 GSPT1P15170 499 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 SLCO1A2P46721 670 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ODR4Q5SWX8 454 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 EXOC8Q8IYI6 725 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 PRPF38AQ8NAV1 312 aaKnown RBP9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 CCDC127Q96BQ5 260 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 MTBPQ96DY7 904 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 VPS39Q96JC1 886 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 ING2Q9H160 280 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 TRIM33Q9UPN9 1127 aa9.39□□□□□ -0.91
SCUBE3-201ENST00000274938 A0A1B0GW55 424 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 FMNL1O95466 1100 aaPredicted RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUX4L2P0CJ85 424 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUX4L3P0CJ86 424 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUX4L4P0CJ87 422 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUX4L5P0CJ88 424 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUX4L6P0CJ89 424 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUX4L7P0CJ90 424 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 HSPD1P10809 573 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 C11orf57Q6ZUT1 292 aaPredicted RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ACAD11Q709F0 780 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 FBXO11Q86XK2 927 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ANKRD36BP1Q96IX9 119 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUX4Q9UBX2 424 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ADAM21Q9UKJ8 722 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 NESP48681 1621 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 A0A1W2PP64 1363 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 FTCDO95954 541 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 PPARGP37231 505 aaPredicted RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 EIF4A3P38919 411 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 PTH1RQ03431 593 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ADCY1Q08828 1119 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 KLHL38Q2WGJ6 581 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 MYLK4Q86YV6 388 aaPredicted RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ACRBPQ8NEB7 543 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 PYROXD1Q8WU10 500 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 GJA10Q969M2 543 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 RCOR1Q9UKL0 485 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ARHGEF12Q9NZN5 1544 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 TYW5A2RUC4 315 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 TMEM247A6NEH6 219 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 KRT38O76015 456 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 OCRLQ01968 901 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 SARM1Q6SZW1 724 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 PARP9Q8IXQ6 854 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DYDC2Q96IM9 177 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ZNF594Q96JF6 807 aaPredicted RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 MRFAP1Q9Y605 127 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 UHRF1BP1LA0JNW5 1464 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 COPEO14579 308 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 IRX1P78414 480 aaPredicted RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ALCAMQ13740 583 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DPCR1Q3MIW9 517 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 CAPRIN2Q6IMN6 1127 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 PPP4R3CPQ6ZMV5 832 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 MAN1B1Q9UKM7 699 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 PCDHA4Q9UN74 947 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 DUOX2Q9NRD8 1548 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 POTEB3A0JP26 581 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 TMOD1P28289 359 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 IL13P35225 146 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 POTEBQ6S5H4 581 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 GRAMD1AQ96CP6 724 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 CYTH2Q99418 400 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 MTRQ99707 1265 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 A0A0D9SFI3 127 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ZYXQ15942 572 aaKnown RBP9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 RUBCNQ92622 972 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 BATF3Q9NR55 127 aa9.38□□□□□ -0.91
SCUBE3-201ENST00000274938 ABCA10Q8WWZ4 1543 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 KRT8P05787 483 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 SERPINB10P48595 397 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 ARL4CP56559 192 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 UBE3CQ15386 1083 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 BBS9Q3SYG4 887 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 INTUQ9ULD6 942 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 L3MBTL1Q9Y468 752 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 BLMP54132 1417 aaPredicted RBP9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 GTPBP10A4D1E9 387 aaKnown RBP9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 NPR1P16066 1061 aa9.37□□□□□ -0.91
SCUBE3-201ENST00000274938 C1orf146Q5VVC0 180 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms