RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZNF444Q8N0Y2 327 aaPredicted RBP14.18□□□□□ -0.14
COL8A1-202ENST00000273342 COA7Q96BR5 231 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 INPP4AQ96PE3 977 aaPredicted RBP14.18□□□□□ -0.14
COL8A1-202ENST00000273342 PIGSQ96S52 555 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 TMBIM4Q9HC24 238 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 GOPCQ9HD26 462 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 ODF2LQ9ULJ1 636 aa14.18□□□□□ -0.14
COL8A1-202ENST00000273342 HMGB1P1B2RPK0 211 aaPredicted RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 PJA2O43164 708 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 SART1O43290 800 aaKnown RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 PPP1R12BO60237 982 aaPredicted RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 LCA5LO95447 670 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 FGRP09769 529 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 NF2P35240 595 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 IL6STP40189 918 aaPredicted RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 TNNC1P63316 161 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 ZNF844Q08AG5 666 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 PRPF4BQ13523 1007 aaKnown RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 NAB2Q15742 525 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 SOGA3Q5TF21 947 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 DZIP1Q86YF9 867 aaKnown RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 PNMA5Q96PV4 448 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 TMEM47Q9BQJ4 181 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 MINPP1Q9UNW1 487 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 LEMD3Q9Y2U8 911 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 SLIT2O94813 1529 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 ERVV-1B6SEH8 477 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 EIF6P56537 245 aaKnown RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 MEI1Q5TIA1 1274 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 MAPKAPK5Q8IW41 473 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 TGFBRAP1Q8WUH2 860 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 FRMPD2Q68DX3 1309 aaPredicted RBP14.17□□□□□ -0.14
COL8A1-202ENST00000273342 KCNQ2O43526 872 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 CALCRLQ16602 461 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 CYB5D1Q6P9G0 228 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 WHAMMQ8TF30 809 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 SEC16BQ96JE7 1060 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 TSG101Q99816 390 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
COL8A1-202ENST00000273342 ALS2Q96Q42 1657 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 HGSO14964 777 aaPredicted RBP14.16□□□□□ -0.14
COL8A1-202ENST00000273342 SERPING1P05155 500 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
COL8A1-202ENST00000273342 SMTNP53814 917 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 IFFO1Q0D2I5 559 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 ECM1Q16610 540 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 UNC13DQ70J99 1090 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 RNF10Q8N5U6 811 aaKnown RBP14.16□□□□□ -0.14
COL8A1-202ENST00000273342 RAPGEF5Q92565 580 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 ATP8A1Q9Y2Q0 1164 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL8A1-202ENST00000273342 CICQ96RK0 1608 aaPredicted RBP14.16□□□□□ -0.14
COL8A1-202ENST00000273342 KRIT1O00522 736 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 TTI1O43156 1089 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 PDE6BP35913 854 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 TNNI2P48788 182 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 SH3RF3Q8TEJ3 882 aaPredicted RBP14.16□□□□□ -0.14
COL8A1-202ENST00000273342 ANKS1AQ92625 1134 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 BAIAP2L1Q9UHR4 511 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 COL4A3BPQ9Y5P4 624 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 COL4A1P02462 1669 aa14.16□□□□□ -0.14
COL8A1-202ENST00000273342 A6NNZ2 444 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 RASSF9O75901 435 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 NTSR2O95665 410 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 TNFRSF8P28908 595 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 ECHS1P30084 290 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 PTK2Q05397 1052 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 DHX9Q08211 1270 aaKnown RBP14.15□□□□□ -0.14
COL8A1-202ENST00000273342 GRM4Q14833 912 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 SNCBQ16143 134 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 SLC18A3Q16572 532 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 TUBB8Q3ZCM7 444 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 PARP9Q8IXQ6 854 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 MYOCDQ8IZQ8 938 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 FUKQ8N0W3 1084 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 BANK1Q8NDB2 785 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 TRIM51Q9BSJ1 452 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 CUEDC2Q9H467 287 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 SH3GLB2Q9NR46 395 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 PARP4Q9UKK3 1724 aaKnown RBP14.15□□□□□ -0.14
COL8A1-202ENST00000273342 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
COL8A1-202ENST00000273342 ZNF804BA4D1E1 1349 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 SLC9A1P19634 815 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 NEDD9Q14511 834 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 AK8Q96MA6 479 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 SELENOSQ9BQE4 189 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 ARPP21Q9UBL0 812 aaPredicted RBP14.15□□□□□ -0.14
COL8A1-202ENST00000273342 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
COL8A1-202ENST00000273342 TPX2Q9ULW0 747 aaKnown RBP14.15□□□□□ -0.14
COL8A1-202ENST00000273342 SSU72P8A0A1W2PR75 194 aa14.15□□□□□ -0.15
COL8A1-202ENST00000273342 SKAP2O75563 359 aaPredicted RBP14.15□□□□□ -0.15
COL8A1-202ENST00000273342 HSPA9P38646 679 aaKnown RBP14.15□□□□□ -0.15
COL8A1-202ENST00000273342 PRPHP41219 470 aa14.15□□□□□ -0.15
COL8A1-202ENST00000273342 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.15
COL8A1-202ENST00000273342 ASIC2Q16515 512 aa14.15□□□□□ -0.15
COL8A1-202ENST00000273342 SPATS2Q86XZ4 545 aaKnown RBP14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms