RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TESPA1A2RU30 521 aaPredicted RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 POC1B-GALNT4F8VUJ3 575 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 CCND2P30279 289 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 NBPF10Q6P3W6 841 aaKnown RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 EP400NLQ6ZTU2 488 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 DTNBO60941 627 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 TAF5LO75529 589 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SLFN14P0C7P3 912 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 ARL4AP40617 200 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 EIF4A1P60842 406 aaKnown RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 IGBP1P78318 339 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SNX1Q13596 522 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 CRLF3Q8IUI8 442 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 CPXCR1Q8N123 301 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 MAML1Q92585 1016 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 GPKOWQ92917 476 aaPredicted RBP eCLIP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 MLXIPQ9HAP2 919 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SLC13A4Q9UKG4 626 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PCDHA1Q9Y5I3 950 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 GJA3Q9Y6H8 435 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SAMD9LQ8IVG5 1584 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PER1O15534 1290 aaPredicted RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PYGLP06737 847 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 FKBP3Q00688 224 aaKnown RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 KCTD16Q68DU8 428 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 ZBTB38Q8NAP3 1195 aaPredicted RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 FBXL13Q8NEE6 735 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 HNRNPCL2B2RXH8 293 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 HNRNPCL1O60812 293 aaKnown RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PDIA3P30101 505 aaKnown RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 KAZNQ674X7 775 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SPOPLQ6IQ16 392 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 TCP11Q8WWU5 503 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 KLHL29Q96CT2 875 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 OLFM3Q96PB7 478 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 AMNQ9BXJ7 453 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 CCDC188H7C350 402 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PCCAP05165 728 aaPredicted RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 MESDQ14696 234 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 NEO1Q92859 1461 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 EEF1B2P24534 225 aaKnown RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 RBL2Q08999 1139 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 FAM47AQ5JRC9 791 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 DEPDC1BQ8WUY9 529 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 FAM193BQ96PV7 902 aaPredicted RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 OSBPL3Q9H4L5 887 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SMYD2Q9NRG4 433 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PCDHA13Q9Y5I0 950 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 MRFAP1Q9Y605 127 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 GRID2IPA4D2P6 1211 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 LRRIQ4A6NIV6 560 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 ARL13BQ3SXY8 428 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 METTL23Q86XA0 190 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 NACC1Q96RE7 527 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 ANO3Q9BYT9 981 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 hCG_1642624A0A1W2PR95 340 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 WDR64B1ANS9 1081 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PAMP19021 973 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 MAGEA9P43362 315 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 RHOT2Q8IXI1 618 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 TMEM247A6NEH6 219 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PRPSAP2O60256 369 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SAT1P21673 171 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SPARCL1Q14515 664 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 ZMYM1Q5SVZ6 1142 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 DARS2Q6PI48 645 aaKnown RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 PCGF5Q86SE9 256 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 SMCR8Q8TEV9 937 aaPredicted RBP8.6□□□□□ -1.03
LIMD1-201ENST00000273317 MTBPQ96DY7 904 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 RMDN2Q96LZ7 410 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 TBX22Q9Y458 520 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 CLIC4Q9Y696 253 aa8.6□□□□□ -1.03
LIMD1-201ENST00000273317 EFCAB6Q5THR3 1501 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 TOM1L1O75674 476 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 TTLL1O95922 423 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 XPAP23025 273 aaPredicted RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 FAM186BQ8IYM0 893 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 PDIK1LQ8N165 341 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 ZNF212Q9UDV6 495 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 UBAP1LF5GYI3 381 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 PTH1RQ03431 593 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 THOC5Q13769 683 aaKnown RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 CERKLQ49MI3 558 aaPredicted RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 CEP170Q5SW79 1584 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 ARL6IP4Q66PJ3 421 aaKnown RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 ADAT2Q7Z6V5 191 aaKnown RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 STAMQ92783 540 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 N4BP2L2Q92802 583 aaPredicted RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 CEP19Q96LK0 163 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 HECW2Q9P2P5 1572 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 RPS8P62241 208 aaKnown RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 FLAD1Q8NFF5 587 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 GFM2Q969S9 779 aaKnown RBP8.59□□□□□ -1.03
LIMD1-201ENST00000273317 CFAP36Q96G28 342 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 CCDC17Q96LX7 622 aa8.59□□□□□ -1.03
LIMD1-201ENST00000273317 TSC22D3Q99576 134 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms