RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TSEN34Q9BSV6 310 aaKnown RBP14.49□□□□□ -0.09
SS18-202ENST00000269138 SENP6Q9GZR1 1112 aaPredicted RBP14.49□□□□□ -0.09
SS18-202ENST00000269138 PHF24Q9UPV7 400 aa14.49□□□□□ -0.09
SS18-202ENST00000269138 MSH4O15457 936 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 CCNT1O60563 726 aaKnown RBP14.48□□□□□ -0.09
SS18-202ENST00000269138 MMP3P08254 477 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 MYL3P08590 195 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 SYT1P21579 422 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 Q4G0T1 1027 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 METTL7BQ6UX53 244 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 CXCL17Q6UXB2 119 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 NECAB2Q7Z6G3 386 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 PCSK9Q8NBP7 692 aaKnown RBP14.48□□□□□ -0.09
SS18-202ENST00000269138 C11orf49Q9H6J7 331 aa14.48□□□□□ -0.09
SS18-202ENST00000269138 DDX25Q9UHL0 483 aaKnown RBP14.48□□□□□ -0.09
SS18-202ENST00000269138 A0A1W2PQ45 241 aaPredicted RBP14.47□□□□□ -0.09
SS18-202ENST00000269138 A0A1W2PQY0 241 aa14.47□□□□□ -0.09
SS18-202ENST00000269138 VPS37CA5D8V6 355 aaPredicted RBP14.47□□□□□ -0.09
SS18-202ENST00000269138 DDX39AO00148 427 aaKnown RBP14.47□□□□□ -0.09
SS18-202ENST00000269138 IPO5O00410 1097 aaKnown RBP14.47□□□□□ -0.09
SS18-202ENST00000269138 DHX15O43143 795 aaKnown RBP14.47□□□□□ -0.09
SS18-202ENST00000269138 CPT1AP50416 773 aa14.47□□□□□ -0.09
SS18-202ENST00000269138 SETQ01105 290 aaPredicted RBP14.47□□□□□ -0.09
SS18-202ENST00000269138 MOXD1Q6UVY6 613 aa14.47□□□□□ -0.09
SS18-202ENST00000269138 PPTC7Q8NI37 304 aa14.47□□□□□ -0.09
SS18-202ENST00000269138 ZNF577Q9BSK1 485 aa14.47□□□□□ -0.09
SS18-202ENST00000269138 MOXD2PA6NHM9 499 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 ZEB2O60315 1214 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 PDCP20941 246 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
SS18-202ENST00000269138 PSMC6P62333 389 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 NBR1Q14596 966 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 PPP4R3AQ6IN85 833 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 FERMT3Q86UX7 667 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
SS18-202ENST00000269138 PPP1R13LQ8WUF5 828 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 GPR20Q99678 358 aa14.46□□□□□ -0.09
SS18-202ENST00000269138 NFASCO94856 1347 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 GSTTP1A0A1W2PQM5 241 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 CCNE2O96020 404 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 HOXD8P13378 290 aaPredicted RBP14.46□□□□□ -0.1
SS18-202ENST00000269138 GCFC2P16383 781 aaKnown RBP14.46□□□□□ -0.1
SS18-202ENST00000269138 RGS19P49795 217 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 TOB1P50616 345 aaPredicted RBP14.46□□□□□ -0.1
SS18-202ENST00000269138 PURAQ00577 322 aaKnown RBP14.46□□□□□ -0.1
SS18-202ENST00000269138 ZNF174Q15697 407 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 DGKDQ16760 1214 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 BRDTQ58F21 947 aaPredicted RBP14.46□□□□□ -0.1
SS18-202ENST00000269138 POTEDQ86YR6 584 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 ETNPPLQ8TBG4 499 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 SLC5A5Q92911 643 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 VTI1AQ96AJ9 217 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 SDF4Q9BRK5 362 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 JPH1Q9HDC5 661 aaPredicted RBP14.46□□□□□ -0.1
SS18-202ENST00000269138 POLR3EQ9NVU0 708 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 SLC9A2Q9UBY0 812 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 MTMR6Q9Y217 621 aa14.46□□□□□ -0.1
SS18-202ENST00000269138 GRIN2DO15399 1336 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 NOP56O00567 594 aaKnown RBP14.45□□□□□ -0.1
SS18-202ENST00000269138 PPFIA4O75335 1185 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 ZNF286BP0CG31 522 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 MCM7P33993 719 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 BECN1Q14457 450 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 LRRC26Q2I0M4 334 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 KAT2BQ92831 832 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 HAS1Q92839 578 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 MTG1Q9BT17 334 aaPredicted RBP14.45□□□□□ -0.1
SS18-202ENST00000269138 KCNMB3Q9NPA1 279 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 DOCK5Q9H7D0 1870 aa14.45□□□□□ -0.1
SS18-202ENST00000269138 STX6O43752 255 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 KPNA6O60684 536 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 CHMP4BP1P59074 171 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 ACTR2P61160 394 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 TTC38Q5R3I4 469 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 UTP14CQ5TAP6 766 aaKnown RBP14.44□□□□□ -0.1
SS18-202ENST00000269138 LRCH2Q5VUJ6 765 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 SLC39A5Q6ZMH5 540 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 TRIM50Q86XT4 487 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 SEPT1Q8WYJ6 367 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 GLT1D1Q96MS3 346 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 NAP1L4Q99733 375 aaKnown RBP14.44□□□□□ -0.1
SS18-202ENST00000269138 C16orf70Q9BSU1 422 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 TMEM60Q9H2L4 133 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 STARD7Q9NQZ5 370 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 TBC1D22BQ9NU19 505 aa14.44□□□□□ -0.1
SS18-202ENST00000269138 GAS7O60861 476 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 PSMD10O75832 226 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 CABYRO75952 493 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 LGALS2P05162 132 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 TCF7P36402 384 aaPredicted RBP14.43□□□□□ -0.1
SS18-202ENST00000269138 RESTQ13127 1097 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 FOXD4L5Q5VV16 416 aaPredicted RBP14.43□□□□□ -0.1
SS18-202ENST00000269138 FOXD4L4Q8WXT5 416 aaPredicted RBP14.43□□□□□ -0.1
SS18-202ENST00000269138 PCYT2Q99447 389 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 RIT2Q99578 217 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 UNC45AQ9H3U1 944 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 NOL7Q9UMY1 257 aaKnown RBP14.43□□□□□ -0.1
SS18-202ENST00000269138 PCDHB6Q9Y5E3 794 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 ELP1O95163 1332 aa14.43□□□□□ -0.1
SS18-202ENST00000269138 NEMFO60524 1076 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms