RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 POTECB2RU33 542 aa24.44■■□□□ 1.5
CDR2-201ENST00000268383 FGFR1OPO95684 399 aaKnown RBP24.44■■□□□ 1.5
CDR2-201ENST00000268383 FAM228BP0C875 321 aa24.44■■□□□ 1.5
CDR2-201ENST00000268383 SFMBT2Q5VUG0 894 aa24.44■■□□□ 1.5
CDR2-201ENST00000268383 POTEBQ6S5H4 581 aa24.44■■□□□ 1.5
CDR2-201ENST00000268383 ZNF572Q7Z3I7 529 aaPredicted RBP24.44■■□□□ 1.5
CDR2-201ENST00000268383 USP17L15C9J2P7 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L13C9JLJ4 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L11C9JVI0 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L18D6R9N7 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L22D6RA61 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L17D6RBQ6 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L19D6RCP7 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L20D6RJB6 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 ACTN1P12814 892 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 ATP1A2P50993 1020 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 FKBP3Q00688 224 aaKnown RBP24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L24Q0WX57 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L6PQ6QN14 398 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 EPB41L5Q9HCM4 733 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 USP17L10C9JJH3 530 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 GNGT1P63211 74 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 GUCY2DQ02846 1103 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 PACS2Q86VP3 889 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 ZIM3Q96PE6 472 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 MXD3Q9BW11 206 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 RAB34Q9BZG1 259 aa24.43■■□□□ 1.5
CDR2-201ENST00000268383 DDX4Q9NQI0 724 aaKnown RBP24.43■■□□□ 1.5
CDR2-201ENST00000268383 PDIA5Q14554 519 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 SLC9C1Q4G0N8 1177 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 PCDHA12Q9UN75 941 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 EPHB4P54760 987 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 KRT12Q99456 494 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 CAPS2Q9BXY5 557 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 POLLQ9UGP5 575 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 SAMM50Q9Y512 469 aa24.42■■□□□ 1.5
CDR2-201ENST00000268383 SHOX2O60902 331 aaPredicted RBP24.41■■□□□ 1.5
CDR2-201ENST00000268383 HEXIM1O94992 359 aaKnown RBP24.41■■□□□ 1.5
CDR2-201ENST00000268383 SHROOM1Q2M3G4 852 aaPredicted RBP24.41■■□□□ 1.5
CDR2-201ENST00000268383 HERC4Q5GLZ8 1057 aaPredicted RBP24.41■■□□□ 1.5
CDR2-201ENST00000268383 RPGRQ92834 1020 aaKnown RBP24.41■■□□□ 1.5
CDR2-201ENST00000268383 BCAS3Q9H6U6 928 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 COL24A1Q17RW2 1714 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 RIMBP2O15034 1052 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 CORO7P57737 925 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 GTF2IP78347 998 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 IQCDQ96DY2 449 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 RIC8AQ9NPQ8 531 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 CEP72Q9P209 647 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 DAGLAQ9Y4D2 1042 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 KIAA0753Q2KHM9 967 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 RC3H1Q5TC82 1133 aaKnown RBP24.41■■□□□ 1.5
CDR2-201ENST00000268383 BCAS4Q8TDM0 211 aa24.41■■□□□ 1.5
CDR2-201ENST00000268383 CCDC43Q96MW1 224 aaKnown RBP24.41■■□□□ 1.5
CDR2-201ENST00000268383 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.41■■□□□ 1.5
CDR2-201ENST00000268383 GRIN2DO15399 1336 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 CASP5P51878 434 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 ITIH3Q06033 890 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 PDCLQ13371 301 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 CFAP221Q4G0U5 840 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 GPBP1Q86WP2 473 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 SCFD1Q8WVM8 642 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 SH3GL2Q99962 352 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 SSU72P8A0A1W2PR75 194 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 MPHOSPH10O00566 681 aaKnown RBP24.4■■□□□ 1.5
CDR2-201ENST00000268383 PRR5LQ6MZQ0 368 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 RUFY1Q96T51 708 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 GGA1Q9UJY5 639 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 ATP6V0A2Q9Y487 856 aa24.4■■□□□ 1.5
CDR2-201ENST00000268383 C6orf229H3BNL8 230 aa24.39■■□□□ 1.5
CDR2-201ENST00000268383 SERPING1P05155 500 aa24.39■■□□□ 1.5
CDR2-201ENST00000268383 KLHL7Q8IXQ5 586 aa24.39■■□□□ 1.5
CDR2-201ENST00000268383 MEIS1O00470 390 aa24.39■■□□□ 1.49
CDR2-201ENST00000268383 HSF2BPO75031 334 aa24.39■■□□□ 1.49
CDR2-201ENST00000268383 PLA2G4BP0C869 781 aa24.39■■□□□ 1.49
CDR2-201ENST00000268383 TAL1P17542 331 aaPredicted RBP24.39■■□□□ 1.49
CDR2-201ENST00000268383 SMARCA1P28370 1054 aa24.39■■□□□ 1.49
CDR2-201ENST00000268383 MAGEA9P43362 315 aa24.39■■□□□ 1.49
CDR2-201ENST00000268383 PPFIA1Q13136 1202 aa24.39■■□□□ 1.49
CDR2-201ENST00000268383 ABCB11O95342 1321 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 PNMA6FA0A0J9YX94 578 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 POTEFA5A3E0 1075 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 POTEIP0CG38 1075 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 NT5C2P49902 561 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 SNAP25P60880 206 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 ZNF543Q08ER8 600 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 PSMD2Q13200 908 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 ASPRV1Q53RT3 343 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 POTEGQ6S5H5 508 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 POTEEQ6S8J3 1075 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 FAM196AQ6ZSG2 479 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 PCDHA2Q9Y5H9 948 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 FAM196BA6NMK8 535 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 NOVP48745 357 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 KLHL30Q0D2K2 578 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 ADAM9Q13443 819 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 TRIM59Q8IWR1 403 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 C8orf37Q96NL8 207 aa24.38■■□□□ 1.49
CDR2-201ENST00000268383 SLC9A1P19634 815 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 NAB2Q15742 525 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms