RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TUFT1Q9NNX1 390 aa18.31■□□□□ 0.52
TPM1-201ENST00000267996 FANCLQ9NW38 375 aa18.31■□□□□ 0.52
TPM1-201ENST00000267996 GDAQ9Y2T3 454 aa18.31■□□□□ 0.52
TPM1-201ENST00000267996 POTEFA5A3E0 1075 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 E9PMD0 336 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 PLA2G4BP0C869 781 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 MUTP22033 750 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 DHX8Q14562 1220 aaKnown RBP18.3■□□□□ 0.52
TPM1-201ENST00000267996 COBLL1Q53SF7 1204 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 SPATA1Q5VX52 437 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 POTEGQ6S5H5 508 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 ADSSL1Q8N142 457 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 UNC45AQ9H3U1 944 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 ZNF408Q9H9D4 720 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 GBA2Q9HCG7 927 aaPredicted RBP18.3■□□□□ 0.52
TPM1-201ENST00000267996 NFE2L3Q9Y4A8 694 aa18.3■□□□□ 0.52
TPM1-201ENST00000267996 NR3C2P08235 984 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 OSBPP22059 807 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 CCND2P30279 289 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 PRCPP42785 496 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 SLC12A3P55017 1021 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 MTMR1Q13613 665 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 EPHA7Q15375 998 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 TRMT44Q8IYL2 757 aaKnown RBP18.29■□□□□ 0.52
TPM1-201ENST00000267996 DDX12PQ92771 950 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 EXOC1Q9NV70 894 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 RWDD2AQ9UIY3 292 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 LCTP09848 1927 aa18.29■□□□□ 0.52
TPM1-201ENST00000267996 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
TPM1-201ENST00000267996 ATP1A3P13637 1013 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 EHHADHQ08426 723 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 PDE4DQ08499 809 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 ITGB3BPQ13352 177 aaPredicted RBP18.28■□□□□ 0.52
TPM1-201ENST00000267996 SYT2Q8N9I0 419 aaPredicted RBP18.28■□□□□ 0.52
TPM1-201ENST00000267996 INPP4AQ96PE3 977 aaPredicted RBP18.28■□□□□ 0.52
TPM1-201ENST00000267996 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 PFASO15067 1338 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 SYNRGQ9UMZ2 1314 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 SOCS7O14512 581 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 MAFGO15525 162 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 PEX10O60683 326 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 SLITRK3O94933 977 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 CYP11B2P19099 503 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 COPB2P35606 906 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 PSMC6P62333 389 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 FANCCQ00597 558 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 PAK1Q13153 545 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 KLHL10Q6JEL2 608 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 GPRASP2Q96D09 838 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 MS4A4AQ96JQ5 239 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 MOV10L1Q9BXT6 1211 aaKnown RBP18.28■□□□□ 0.52
TPM1-201ENST00000267996 TBC1D22BQ9NU19 505 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 RGL1Q9NZL6 768 aa18.28■□□□□ 0.52
TPM1-201ENST00000267996 STAM2O75886 525 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 SLC25A27O95847 323 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 PPP1R2P41236 205 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 C2orf69Q8N8R5 385 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 NEK9Q8TD19 979 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 DYDC2Q96IM9 177 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 IWS1Q96ST2 819 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 TXNRD2Q9NNW7 524 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 NMRK2Q9NPI5 230 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.52
TPM1-201ENST00000267996 CTNND2Q9UQB3 1225 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
TPM1-201ENST00000267996 EYA4O95677 639 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 CYP4A11Q02928 519 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 STK4Q13043 487 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 PSMD2Q13200 908 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 ARSHQ5FYA8 562 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 CDKAL1Q5VV42 579 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 NELFBQ8WX92 580 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 DHTKD1Q96HY7 919 aaPredicted RBP18.26■□□□□ 0.51
TPM1-201ENST00000267996 IFNKQ9P0W0 207 aa18.26■□□□□ 0.51
TPM1-201ENST00000267996 FRMD3A2A2Y4 597 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 CHMP2AO43633 222 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
TPM1-201ENST00000267996 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
TPM1-201ENST00000267996 CETPP11597 493 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 GTF2A2P52657 109 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 STX17P56962 302 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 STIM1Q13586 685 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 NLRX1Q86UT6 975 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 GPBP1Q86WP2 473 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 ANKRD35Q8N283 1001 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 KIAA0895Q8NCT3 520 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 GTF3C2Q8WUA4 911 aaPredicted RBP18.25■□□□□ 0.51
TPM1-201ENST00000267996 PAGR1Q9BTK6 254 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 XPO4Q9C0E2 1151 aaKnown RBP18.25■□□□□ 0.51
TPM1-201ENST00000267996 SAMSN1Q9NSI8 373 aaKnown RBP18.25■□□□□ 0.51
TPM1-201ENST00000267996 ASTN1O14525 1302 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 ATP9AO75110 1047 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 RGS20O76081 388 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 ITGBL1O95965 494 aaPredicted RBP18.25■□□□□ 0.51
TPM1-201ENST00000267996 SSBP05455 408 aaKnown RBP eCLIP18.25■□□□□ 0.51
TPM1-201ENST00000267996 FCER1AP12319 257 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms