RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TMX4Q9H1E5 349 aaPredicted RBP12.39□□□□□ -0.43
MSH3-201ENST00000265081 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 WDR93Q6P2C0 686 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 EHBP1Q8NDI1 1231 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 ARGLU1Q9NWB6 273 aaPredicted RBP12.39□□□□□ -0.43
MSH3-201ENST00000265081 ARHGAP20Q9P2F6 1191 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
MSH3-201ENST00000265081 PRLRP16471 622 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 HOXD13P35453 343 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 VAV2P52735 878 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 CACNB3P54284 484 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 ITIH3Q06033 890 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 CATSPER3Q86XQ3 398 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 PRMT6Q96LA8 375 aaPredicted RBP12.39□□□□□ -0.43
MSH3-201ENST00000265081 TSGA10Q9BZW7 698 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 PRDM4Q9UKN5 801 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
MSH3-201ENST00000265081 SSU72P8A0A1W2PR75 194 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 CYLC1P35663 651 aaPredicted RBP12.38□□□□□ -0.43
MSH3-201ENST00000265081 FKBP3Q00688 224 aaKnown RBP12.38□□□□□ -0.43
MSH3-201ENST00000265081 GIT2Q14161 759 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 COL4A3BPQ9Y5P4 624 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 SASH3O75995 380 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 BMP3P12645 472 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 HAUS3Q68CZ6 603 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 PDXDC1Q6P996 788 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
MSH3-201ENST00000265081 FBXO11Q86XK2 927 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 FAM151AQ8WW52 585 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 NENFQ9UMX5 172 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 WDR81Q562E7 1941 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 KCNA3P22001 575 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 FAM26FQ5R3K3 315 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 FKBP15Q5T1M5 1219 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 MYO6Q9UM54 1294 aa12.38□□□□□ -0.43
MSH3-201ENST00000265081 TUBBP07437 444 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 MTIF2P46199 727 aaKnown RBP12.37□□□□□ -0.43
MSH3-201ENST00000265081 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■□□□ 14.2
MSH3-201ENST00000265081 TRIM10Q9UDY6 481 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 FAM196BA6NMK8 535 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 POTECB2RU33 542 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 E9PMD0 336 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 MSH4O15457 936 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 DYMQ7RTS9 669 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 SLC5A5Q92911 643 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 GJA10Q969M2 543 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 CEP72Q9P209 647 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 FBXL5Q9UKA1 691 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 PRR12Q9ULL5 1215 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 TRIM21P19474 475 aaKnown RBP12.37□□□□□ -0.43
MSH3-201ENST00000265081 CCDC65Q8IXS2 484 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 RUBCNQ92622 972 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 TSG101Q99816 390 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 HSD17B14Q9BPX1 270 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 LACRTQ9GZZ8 138 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 NUCKS1Q9H1E3 243 aaKnown RBP12.37□□□□□ -0.43
MSH3-201ENST00000265081 SH2D4AQ9H788 454 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 ZNHIT6Q9NWK9 470 aaKnown RBP12.37□□□□□ -0.43
MSH3-201ENST00000265081 FAM184BQ9ULE4 1060 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 SIP14410 1827 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 WDR90Q96KV7 1748 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 CHRNA5P30532 468 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 TCP10Q12799 353 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 TRAF1Q13077 416 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 BEND6Q5SZJ8 279 aaPredicted RBP12.37□□□□□ -0.43
MSH3-201ENST00000265081 BORCS6Q96GS4 357 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 GANQ9H2C0 597 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 TDRD3Q9H7E2 651 aaKnown RBP12.37□□□□□ -0.43
MSH3-201ENST00000265081 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
MSH3-201ENST00000265081 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 BTNL10A8MVZ5 291 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 PSMD10O75832 226 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 RBM26Q5T8P6 1007 aaKnown RBP12.36□□□□□ -0.43
MSH3-201ENST00000265081 FAM83AQ86UY5 434 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 RPGRIP1Q96KN7 1286 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 TARSL2A2RTX5 802 aaKnown RBP12.36□□□□□ -0.43
MSH3-201ENST00000265081 GH2P01242 217 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 UBE4BO95155 1302 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 TMCO3Q6UWJ1 677 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 JAKMIP2Q96AA8 810 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 PNKPQ96T60 521 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 STRA6Q9BX79 667 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 AIPL1Q9NZN9 384 aa12.36□□□□□ -0.43
MSH3-201ENST00000265081 SLC16A3O15427 465 aaKnown RBP12.35□□□□□ -0.43
MSH3-201ENST00000265081 KRT86O43790 486 aa12.35□□□□□ -0.43
MSH3-201ENST00000265081 GDF11O95390 407 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms